Manduca sexta (tobacco hornworm): 115448239
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Entry
115448239 CDS
T07401
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115448239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115448239
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115448239
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115448239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
115448239
NCBI-ProteinID:
XP_030031464
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All DBs
Position
6:complement(6568207..6575097)
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AA seq
435 aa
AA seq
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MKKRTSSRHNSFSQDDQVMANLNFQQAPRSLASGGVGGVGGRVSSGLVGGVSGHVTPTFG
GALSPGRGSTAMPGGAPPSMASRATLFGQRAFADRRVPMPTTLSQPNSNSMSSMSNLSRF
NASNNYHSVFGEGGDTSTPPLLDLSEFPSLTARGAGDQAPAAAPPPPGSKPYVGMVKQPT
SEQSEFTMSSEDFPALPGTSAGAAGAAAAAAAAGGSGGPAPPSTDLVHVPDKARKGIQTS
PDGKVTNIPETMIPNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLYLT
FAGPWADTPCRPQDMDYHVPPEYLINGSIREKLAPLRLNRYKEDLLFYLFYCFVGDVLQI
AAASELYNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVAKEFHLDY
SKLEGRPQLPPHVLT
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgcacatcgagcaggcataacagcttttcacaagatgaccaagttatggca
aacttgaatttccagcaagcacctcgaagcttagcaagtggtggagtgggcggcgtgggc
ggtcgcgtgagctcagggttggtgggcggcgtctccgggcatgtgacgccgacgttcggc
ggcgcgctgtcgcccggccgcggttccacggcgatgccgggcggcgccccgccgtccatg
gcctctcgagccacactcttcggacagcgggcgttcgctgatcgcagggtaccgatgccg
acgaccttgtcgcaacctaattctaattctatgtcgagtatgagcaacttgtcccggttt
aacgcaagcaacaattaccattctgtgttcggcgagggcggcgacacgtcaacgccaccg
ctactggaccttagcgagttcccgtcgttgacggcgcgcggcgccggagaccaggcgccc
gcagccgctccaccgccacctggctctaaaccttacgtgggtatggtgaagcagccgacg
tcggagcagtcggagttcacgatgtcgtcggaggacttccccgcgctgcccggcacgtcg
gcgggcgcggccggagcggcggcagcagcggcggccgcggggggctccggcgggcccgcg
ccgccctccaccgacctcgtgcacgtgcccgacaaggcgcgcaagggcatacagacctca
cctgacggtaaagtgacgaatataccagagacaatgatacccaatcagttcggtatagtg
gggctactgacgttcataagagcagcggagtcagatcccagtctcgtgtcgttagccctc
ggacaggacttgacggcactcggtttgaatctaaattcaccggacaatctatatttgact
tttgctggaccttgggcggacacgccgtgcagaccacaggatatggactaccacgtgcct
ccggaatatttaataaacggttcaataagagaaaagctggcgccgttacgactgaatcga
tataaggaagatctattattttacctgttttattgttttgtcggtgacgtgctgcaaatt
gcggctgcgtcggaactatataatcgcgaatggcggtatcacatggaggagaaggtgtgg
atctctcaagcgcccggcatgccgatggtggaaaaaacatcgacgtacgagcgcggcacc
tactacttctttgatgcgcataattggcgcaaggtggcgaaagaattccacctggactac
agcaagctagagggacggccgcagctgccgccgcatgtgctcacctag
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