Manduca sexta (tobacco hornworm): 115448269
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Entry
115448269 CDS
T07401
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msex03037
]
115448269
Cilium and associated proteins [BR:
msex03037
]
Primary cilia and associated proteins
USH complex and associated proteins
115448269
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
CCDC174_GRSR
Motif
Other DBs
NCBI-GeneID:
115448269
NCBI-ProteinID:
XP_037297595
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Position
23:complement(5509298..5582244)
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AA seq
859 aa
AA seq
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MTRIVVKIYENYKNKVCGVTPGMRSGEAAEGSELAEFGARWPPPYAHGYGWTRSATPQHP
PAHHLARHSRSQQWLQDNRQSYEAEDARARARGGVYYSPPGTSYTIVERPASSHGHHTSY
QHHYSGKLSRAPYLGSTNIANSAAGAASLRNSTNHLSATNGKKRPISPEQVLRLFGQGGA
AALGKALPPSHPPAPLPAPLTTRRHSPASSPSSTTHHAIYRGGERERERPYSSGGAAPPP
EPATRTVTMSRDPADSHGFGICVKGGKEAGVGVYISRVEEGSVAERAGLRPGDSILQVNG
TPFSGISHEDALKMLKSCRQLTMTVRTAGALVGRASCSWMDRYGRPASPPPLRPTRSASK
DRSIRRVDLCIEPGQSLGLMIRGGLEYNLGIYITGVDKDSVADRAGLMVGDQILEVNGQS
FVDVTHDEAVAQLKYHKRMSLLVRDVGKVPHACTAYGERDPAPRISGWGRRRGAAAVAVE
QKARSLLPQSDLPAIAYYMEEYAARRLTPDAFLTVLRDLLDTPQKYTLLTEIREFMLPED
RPRFDELVYKRGEETVDYHFKRAGERHNMLPSSTMHELHDPEGPVEAPLVADHRSPSEDS
GLGLPPHDHYRSGRAWRAPDAPPPDDDLDPPHEEYEDEGGRSRRHSSPCNSREGSTTALH
TQHYDDSDQCGYLEGLRSSLGGWTQKVKSWYWGRPLELAHNLSRSFDMKEESGALLENRE
GIRRHQSMQRLQHGEQQMDEGRAARVVPDHHGNLRITVQKTKPILGIAIEGGANTKHPLP
RIINIHEHGAAYEAGGLEVGQLILAVDGHRVEGLQHQDVARLIAESFAQRDKPEIEFLVV
EAKKSNLEPKPTALIFLEA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtattgtggtgaaaatatatgaaaactataagaacaaagtgtgtggggtgacc
cccggcatgaggtcgggggaggcggcggaggggtcggagctggcggagttcggcgcgcgc
tggccaccgccgtacgcgcacggctacggctggacgcgctccgccacaccgcagcatccg
cctgcgcaccatctcgctaggcattcgcgatcacaacagtggctgcaggacaaccggcaa
agctacgaggcggaggacgcacgcgcacgtgctcgcggcggtgtttactactccccgccc
ggtaccagctacaccatcgtcgagcggccggcttcctcgcacggccaccacacctcctac
cagcaccactactcgggaaaactctcccgcgccccgtatctcggctctactaacatcgct
aacagtgcagcaggagcggcgagtttaagaaacagcaccaaccacttaagtgccacaaac
ggcaagaagcggccgatatcgccagagcaggtgttgcggttgttcgggcagggaggagcc
gcggctctgggcaaggcgctcccgccctcgcatccgcctgcgccactgcctgcaccactc
accaccaggagacattcaccagcaagcagccccagcagcaccacccaccatgcgatatac
cggggcggggagcgggagcgcgagcggccatactcgtcagggggcgcggccccgccgccg
gagccggccacgcgcaccgtcaccatgagccgggaccccgccgactcgcatggcttcggc
atctgcgtcaaaggcgggaaggaggctggcgtcggtgtatatatatcgagggtggaggaa
ggctccgtggcggagcgagctggtctccggcccggtgattctatcctgcaagttaacgga
actcctttctcaggaatctctcatgaagacgcacttaagatgctgaagtcatgccgtcag
ctaacgatgacagtgcgaacagctggggcgctggtcgggagagcgtcttgctcatggatg
gacaggtacgggaggccagcgtcgccgcccccgctccgacctacgcgctccgccagcaaa
gatcgatctatacgaagggtggatctttgcatagagcccggacaatcactgggacttatg
atccgcggcggcctggagtacaaccttggcatttacattacaggcgtggacaaggattct
gtggctgacagagctggtcttatggttggcgaccaaatcctagaagtgaacggacaatct
tttgtggatgtcacacacgacgaggcggtggcacagttgaagtaccataaaaggatgtcg
ttattggtcagagatgtcggcaaagttcctcatgcatgcactgcgtatggagaaagggac
ccggcacctagaataagcggttggggtagacggagaggcgcagctgcggtggcggtggag
caaaaagccagatctctactgccgcagagtgatttacccgcaattgcgtactacatggag
gagtacgcggcacggcggctcactcccgacgcattcctcactgtgctcagggatttatta
gatacgccgcagaagtacaccctgctgaccgaaatccgagaatttatgcttcccgaggat
cgaccgagatttgatgagcttgtatataaacgtggagaagagacggtcgattatcatttt
aagcgggcaggagagcgccacaacatgcttccttcctcgacgatgcatgaattgcacgac
ccggaggggccggtggaggcgcccctcgtggccgaccaccgctcgccctctgaggactcc
ggcctgggcctgccgccgcacgatcactacaggagcgggcgcgcgtggcgagcgccggac
gcgccaccgcctgacgacgacctggacccaccgcacgaggaatatgaagacgagggtgga
cgatcacggcggcactcatctccgtgtaactcccgagagggcagcaccactgcactgcat
acacagcactacgacgactcggaccagtgcggctatctcgaggggctgcgctcatcactc
ggtggctggacgcagaaagttaaatcatggtactggggacgacctctagagttagcacac
aatctgtcacgaagcttcgatatgaaagaagagagcggtgctttgcttgagaatcgagag
ggcatccggaggcaccagtcgatgcagcggctgcagcacggcgaacagcagatggacgag
ggacgcgcggcacgtgtggtgcccgaccaccacggcaacttgcgcataaccgtgcagaaa
accaaaccgatacttggcatcgccatcgagggcggcgccaacaccaagcatccgctgcct
cgaattattaacatacatgagcacggggcagcgtacgaagctggaggacttgaagttggt
cagctaatattagcggtggatggacatcgagtggaaggcctgcagcaccaggatgtcgct
cgacttattgccgagtcttttgctcagagagataaaccggaaatcgagttcctagtcgta
gaagcaaagaaatcgaacctggaaccaaagccgactgcactaatatttctggaggcctaa
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