KEGG   Manduca sexta (tobacco hornworm): 115448333
Entry
115448333         CDS       T07401                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03020  RNA polymerase
msex03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115448333
  09124 Replication and repair
   03420 Nucleotide excision repair
    115448333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msex03021]
    115448333
   03019 Messenger RNA biogenesis [BR:msex03019]
    115448333
   03400 DNA repair and recombination proteins [BR:msex03400]
    115448333
Transcription machinery [BR:msex03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     115448333
Messenger RNA biogenesis [BR:msex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115448333
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115448333
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 115448333
NCBI-ProteinID: XP_030031597
LinkDB
Position
13:12099894..12103242
AA seq 173 aa
MFYHISLEHEILLHPRYFGPQLLDTVKQKLYIEVEGTCSGKYGFIIAITTIDSIGAGLIQ
PGQGFVVYPVKCKAIVFRPFKGEVLDAIVTQVNKVGMFAQIGPLTCFISHHSIPADMEFC
PNVNPPCYKSKQEDNVIQEEDVIRLKIVGTRVDATGIFAIGTLMDDYLGLVTQ
NT seq 522 nt   +upstreamnt  +downstreamnt
atgttttatcatatttccctagaacatgaaatcttactgcacccaagatatttcggacct
cagctactggatacagtaaaacagaagttatacatagaagtagaaggcacttgtagcggc
aaatatggttttattatagcaataacaacaattgatagtataggggcgggactgattcag
cccgggcaagggtttgtggtgtatcctgtgaaatgcaaagccatagtgttcaggccgttc
aaaggagaggttcttgatgcaattgtcacacaggtcaacaaggttggaatgtttgcacaa
attggtccgttaacatgctttatatctcaccattcaatcccagcggatatggagttctgt
cccaatgtgaatcccccttgctacaagagcaaacaggaagataatgtcatacaggaagag
gatgtgattaggctaaagatagtgggtacgagggtcgacgccactggcattttcgccatt
ggcaccttaatggacgattatttaggtttagtgacacagtaa

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