KEGG   Manduca sexta (tobacco hornworm): 115448346
Entry
115448346         CDS       T07401                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03013  Nucleocytoplasmic transport
msex04141  Protein processing in endoplasmic reticulum
msex04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115448346
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115448346
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    115448346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msex03019]
    115448346
   04131 Membrane trafficking [BR:msex04131]
    115448346
Messenger RNA biogenesis [BR:msex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115448346
Membrane trafficking [BR:msex04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    115448346
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    115448346
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    115448346
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 EIF3I Beta-prop_RIG_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 115448346
NCBI-ProteinID: XP_030031612
LinkDB
Position
13:complement(12087259..12088745)
AA seq 313 aa
MITVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPV
WQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSIAWAPAEYGLILA
CCSSDGSVSIITYAQDTGNWEVKKIPGAHAIGVNSISWCPAISADLNLDPLSNKEAPKRI
VTGGCDNLIKIWREQGEQWVEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVVIW
TSDDNVSWTPTILNTFDDVVWSVSWSLTGNILAVXGGDNKVSLWREGTDGQWLCISEVAK
GLGQTTNDEPSTL
NT seq 942 nt   +upstreamnt  +downstreamnt
atgattaccgtactgaacactatcgataccggccatgaggatatgatacacgacgctgaa
ttggattactacggcttgaaattggcaacctgttcttcagataattctgtaaaaatatac
gacatcaagagcggtacacaaactctagcagcagacctgaagggacatttcgggcctgtc
tggcaggtagcttgggcacatcccaaatacggtaacctcctagcctcgtgttcgtacgac
agaaaggtaatcatttggaaagaatccggggagtggacgaaactgtatgaatacaccgga
cacgagagctcagtgaactccatagcgtgggcgccggctgagtatgggctcatactagcg
tgttgcagttccgacggttcagtctcaataataacttacgcacaggacactggcaactgg
gaggtaaagaagattccgggcgcgcatgctataggtgtcaactcaatcagttggtgccca
gctatctctgctgatttaaacttggatcctcttagcaataaggaagcaccaaagaggatt
gtgacgggcggatgtgataatttgataaagatatggagggagcaaggtgaacagtgggta
gaagaaaacaggttggagatgcacatggactgggtcagagatgtggcatgggctccatcc
ctcggcctccaaaggtccatgattgccagctgctcccaagacaagagggttgtcatctgg
accagtgatgacaatgtctcttggacaccaactattctgaacacttttgatgatgtggtc
tggagtgtgagctggtctctcactgggaacatcctggcagtgntcggaggcgataataaa
gtcagtttgtggagagagggaaccgacggccagtggctatgcataagtgaggtggctaaa
ggattgggccaaactacaaatgatgaaccaagcaccctctga

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