Manduca sexta (tobacco hornworm): 115448455
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Entry
115448455 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115448455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115448455
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115448455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
DUF2207_C
DUF2277
Sgf11_N
Motif
Other DBs
NCBI-GeneID:
115448455
NCBI-ProteinID:
XP_037301600
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MLPESLEARERKDDYEIFIEFKWSVSLDERFLYTLGDVRRVHWHPNSLSHVLVLVSDNTI
RLYNIALRSGPKLVKVYTIGPKPSSLLAGKTILDSLGDTAVDFTPTPDGDQLLILXGDGE
VYMLSCDLESKSPPHPKLTGPIAIYPPADDNYGSESCSILALGGGDVPPMVIIATCTASI
YHCLLLPNSNESEAANGDSHALYVVETVELNIVLNSEDDALQYSYPVQLIQCAGGAYAPA
LAHYARGDEDAESLLASLCSRPSVSRYVVHTGGARAPCAPASAVVTAPPLPTLLVLCADG
ALIARSLEPYDLEEQLYKEIQLKNPALEQDDLRNMMKERQKLTFSSIIQDILTREVSQPN
PTHGPATRAQPQGVSRNAELCVRAAARQYVRRLARAAAALADKLRAVHTLAERQRGWLHA
LQKEIDDVQLQSVVFGEKACSAVVRGLRASYRASPAERELLAELHTYKRCRERFADQIQQ
LKQHSKRNAEEINKWQEEYKKKDAALGKTHSDSIQSILQQQTLQVSTLIEETKLLKDQLS
IV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctgaaagtcttgaagcaagagagagaaaagatgactatgaaatattcatagaa
ttcaaatggagcgtgtcactcgacgagaggttcctctacacattgggagatgtccgtcgc
gtgcactggcatccgaattcactgtcacacgtcctcgtgctggtctctgataatactatc
agactgtataacatagctctccgttcgggcccgaagctcgtcaaggtgtacacgatcggc
ccgaagccgtccagcctgctcgccgggaagacgatcctggacagcctcggagacactgcg
gtggacttcacccccacaccggatggggaccagctgctcatcctgnagggagatggcgag
gtttacatgctgtcgtgtgatttggagagtaaaagcccgccccacccgaagctgaccggg
ccgatcgcgatctaccccccagcggacgacaactacggctcggagtcgtgctcgatcctc
gcgctgggcgggggggacgtgccgcccatggtcatcatagccacctgcaccgcgtccata
taccactgtttgctgctgccgaatagtaacgaatcagaagcggcaaacggcgacagccac
gccctgtacgtggtggagaccgtcgaactgaacatcgtactgaactcggaggacgacgcg
ctacaatactcttatccagtgcagctgatccagtgcgcgggcggcgcgtacgcgccagcc
ctcgcacactacgcgcgcggggacgaggacgcagagagcttgctggcgagcctgtgctcg
cggccgagcgtgtcgcggtacgtcgtgcacacgggcggcgcgcgggcgccgtgcgcgcca
gcgagcgcggtggtgacggcccctccactccccacgctgctggtgctgtgcgctgacggc
gcgctcatcgccagatctctagaaccgtacgatttagaagaacagctgtacaaagaaatt
caactgaaaaatcccgcgcttgaacaagacgacctgcgcaatatgatgaaagagcgccag
aagctgacgttctcgtcgatcatccaagacatcctcacgcgggaggtgtcgcagccgaat
cctacacacggaccggcgacacgagcccagccccaaggagtgtctcgaaacgctgagctc
tgcgtgcgtgcggctgcgcggcagtacgtgcgcagactcgcgcgcgccgcggccgcgctc
gccgacaagctgcgcgccgtgcacacgctcgccgagcggcagcgggggtggctgcacgcg
ctgcagaaagaaatagacgacgtacaactacaatcggttgtttttggagagaaagcgtgt
tccgcagtggtccgcggcctgcgcgcgagctaccgcgcctcgcccgccgagcgggaactc
ctcgccgagctgcacacctacaagcggtgccgcgaacggttcgccgatcagatacagcaa
ctcaaacagcactccaaacggaacgctgaagagatcaataaatggcaagaagaatacaag
aagaaagacgcagctttgggcaaaacgcatagcgactcgatccaatctattctacaacag
caaacgctccaagtgtccacgcttattgaagaaacgaagctactgaaagatcaactcagc
atagtttag
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