Manduca sexta (tobacco hornworm): 115448801
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Entry
115448801 CDS
T07401
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03030
DNA replication
msex03410
Base excision repair
msex03420
Nucleotide excision repair
msex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115448801
03410 Base excision repair
115448801
03420 Nucleotide excision repair
115448801
03430 Mismatch repair
115448801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msex03032
]
115448801
03400 DNA repair and recombination proteins [BR:
msex03400
]
115448801
DNA replication proteins [BR:
msex03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115448801
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115448801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
AAA_22
AAA_5
AAA_30
AAA_14
PTCB-BRCT
AAA_16
RNA_helicase
AAA_33
AAA_18
RuvB_N
AAA_assoc_2
AAA_17
AAA_19
RCF1-5-like_lid
AAA_11
Motif
Other DBs
NCBI-GeneID:
115448801
NCBI-ProteinID:
XP_030032221
LinkDB
All DBs
Position
28:complement(12847503..12859472)
Genome browser
AA seq
1060 aa
AA seq
DB search
MSRDIRSFFLPKKSQKPKDEDDDIIPESPDVQIKNKKKEPRKKRVIHDSDDETNTKKTSL
VSNKSPRNKSKPDLKEVKVVDLFGNAPIKRTEPLVKKSKKQTETGIHSDDEFEKSLLEID
SVAVGDKPEIKQFDGGNSESNHKDTTTLKTPKNKQKAKSPAKAVVTSAKQNYANKKEESK
LNSKRKFSEFAEIEVHNEEDNIKRKKMDVSVCDNKTKVKQLSEDNDDADVSTFEDESSSK
HKKKKVNTSLNESVLTDEERHERKMHSAALYQKYLHRSGPKHLGAKEMPEGSPDCLKNCA
FLLTGVLDSFEREEIVEAINKYSGCVKNAISKKVTHVLAGEDAGPAKMSKALELGIKIIS
EDDFLQMIADSKNSKNKTSAKNDTNDDTNNKNHSNKSKKSPKDKSVDKSIIDIKKEKSPK
EKHTNVTTVKEEKSSENVKVNAKNSNKSINSGEIKKDMKIDKKSIKTEKQDSESSNKNTT
VISDVKREDQKPIHIVPASMWVEKYKPQNVKQIIGQHGDASNVKKLTNWLTKWYVNRKAK
LPKPSPWAKNYDGGYYKAALLSGPPGVGKTTTVSLVCKELGFDMVEYNASDTRNKTLIKE
QIGEMLTTKSLSAYAKGDVGKQAVTKKHVLVMDEVDGMAGNEDRGGLQELINLIKMTSVP
IICMCNDRNSQKMRSLVNYCYDLRFNRPRVDQIKSAMMSICFKEGLKVAPDVLSQLIVAA
NQDVRQTLNLLSMWAVDPDLADTDRLRKDTKTVKKDIKLGPWEAVRRVFSAEDHKSMSIH
DKSDLFFYDYSLAPLFVQENYLQVAPHCPKHEVLQRISKAADSISLGDLVDKRIRSAQAW
SLLPTQAMYSSVIPGHELAGHVAGQILFPGWLGKNSRAGKLHRLCQEIHAHTRLSTSGSK
SSIFLDYCTHLRDAIVNPLIKDKSDGIAKSLEVLESYHLLREDLDSLVELSVWPGQRNPT
ILIDSKVKAAMTRTYNKTSSALPYAPGTIKRGSARDDQEAMDDEELSDQPEDSDPENDAL
IKKKKTKETEKPSSSKEKPGASKEKPSSSKGKASNKAKKK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatataaggtcattcttcttacctaaaaaatcgcaaaaacctaaagatgag
gatgatgatattattcccgagtcacctgatgtgcaaatcaaaaacaagaaaaaagaacct
agaaaaaaaagagttattcatgattcagatgatgaaacaaatactaagaagacatcttta
gtgtcaaataagtcaccgcgaaacaaatctaaaccagatcttaaagaggtgaaagttgtt
gatctttttggcaatgcccctataaaaagaactgaacctttagttaagaaaagcaaaaag
cagactgagaccggtatacactcagatgatgaatttgaaaagagtcttctagaaattgat
agtgttgctgtaggagataaaccagaaataaaacaatttgatggtggtaattcagaatct
aatcacaaagacaccaccactttaaaaacacccaaaaacaaacaaaaagcaaaatcccct
gctaaagctgtagttacctcagcaaaacaaaattatgcaaataagaaagaagaatcaaag
ttgaacagcaagaggaaattttctgaatttgctgaaatagaggttcataatgaagaagat
aacataaaaagaaagaaaatggatgtaagtgtgtgtgacaataaaactaaagttaaacaa
ctaagtgaagacaatgatgatgcagatgtttcaacatttgaagatgagtcctcttctaaa
cataaaaaaaagaaagtcaatacaagcttaaatgaatcagttctaacggatgaagaacga
catgaaagaaagatgcattccgctgccttataccagaagtatttgcacagatctggccct
aagcatttgggagcaaaggaaatgccagagggttcaccagattgtttgaaaaattgtgca
tttttactgactggagtgttagattctttcgaaagagaggaaattgtggaagcaataaac
aaatatagtggttgcgttaaaaacgcaattagtaagaaggtgacccatgttttggcgggc
gaagatgcaggaccagcaaaaatgtcgaaagccctggaattaggaatcaaaataattagt
gaggatgattttttgcaaatgattgcagactctaagaactctaagaataaaacatctgct
aaaaatgatacaaacgacgacactaataataaaaatcattcaaataaaagcaaaaagagt
cctaaagacaaaagcgttgataaaagtataattgatatcaaaaaggaaaaatccccgaag
gaaaaacatacaaacgtaactacggtcaaagaagaaaaatcaagtgaaaacgttaaagtt
aatgccaaaaactctaataaatcaataaattcaggcgaaattaaaaaagacatgaaaatt
gacaaaaaaagtataaaaacagaaaaacaagattcagaatcaagtaataaaaatacaact
gtcatatcagacgttaaaagagaagatcaaaagccaatccatatagtgcctgcatctatg
tgggtagaaaaatacaaaccacagaatgtcaaacaaataattggccaacatggcgacgca
agcaatgttaaaaaattaacaaactggctgactaaatggtacgtaaataggaaagctaaa
ttgccgaagccaagcccgtgggcaaagaattacgatggaggctactacaaagcagcctta
ctttctgggcctcctggagttggtaaaacaacgacagtatcgctagtgtgcaaagagtta
ggcttcgacatggtggagtacaacgcgtcagataccagaaacaaaactctaatcaaggaa
cagattggggaaatgttaaccaccaaatcgctatcggcttacgctaaaggtgatgttggt
aaacaagcagtgaccaagaaacatgtcctcgtcatggacgaagtggacgggatggctggc
aatgaggacagaggtggtctccaagagttgataaatcttataaagatgacgtcagtgcca
atcatttgcatgtgcaacgacaggaacagtcagaaaatgcgctcgctcgtcaactactgt
tacgatctgaggttcaacaggccacgggttgaccagattaaatcagcgatgatgtcgata
tgtttcaaagagggtctgaaggtcgccccagacgtactgtcgcagttaatagtggccgcc
aaccaggacgtacgacagacccttaacttgctgtctatgtgggctgtggatcccgactta
gccgacactgaccgcttgagaaaagataccaaaactgtgaagaaagatattaaattgggc
ccgtgggaggcggttcggagagtgttctcggctgaagaccacaagtcgatgagcatccac
gacaaaagcgatcttttcttctacgattacagcctggcgccactgttcgtgcaggagaat
tatctgcaggtcgcgccacactgccccaaacatgaagtgttgcagcggataagtaaggca
gcggacagcatcagtttaggcgacctggtcgataagaggatacgcagcgcacaggcttgg
agtctactgcccacacaggctatgtacagttctgtgattccggggcatgaactggcgggc
cacgtggccggacaaatactgttcccgggctggctcggaaagaactcgcgcgccggcaaa
ctgcaccggctgtgtcaggagatacacgcgcatacgcgactcagcacgtcaggttcaaaa
tcgtcaatattcttggactattgtacccacttacgcgacgcgatagtcaacccgttgatc
aaggacaagtcggacggtattgctaaatcgttagaggtgctagaatcctatcacctgttg
agggaagacctggactccctggtggaattgtcggtctggccagggcagaggaatcccacc
atactgattgattcaaaggtaaaagcggctatgacgcgtacatacaataagacgtccagc
gcgctgccgtacgcgcctggaaccataaagcgaggctccgcgcgggacgaccaagaggcg
atggacgacgaggagctctccgaccagcccgaagacagcgaccccgaaaatgatgctttg
ataaagaaaaagaaaacgaaagaaactgaaaagccaagttccagtaaagaaaaaccaggt
gccagtaaagagaaaccaagttcaagtaaaggcaaagcttcaaataaagccaaaaagaaa
taa
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