KEGG   Manduca sexta (tobacco hornworm): 115449064
Entry
115449064         CDS       T07401                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115449064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msex03041]
    115449064
   03036 Chromosome and associated proteins [BR:msex03036]
    115449064
Spliceosome [BR:msex03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115449064
 Complex B
    115449064
 Complex C
   U2 SnRNP specific factors
    115449064
Chromosome and associated proteins [BR:msex03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    115449064
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG UTP20_N
Other DBs
NCBI-GeneID: 115449064
NCBI-ProteinID: XP_037295464
LinkDB
Position
17:7261938..7271363
AA seq 1346 aa
MLLRLGKMDKIPRTHEAIEAQIREIQSKKAEQPENGSNKGVSLGETYYDSDIYDNAGQGG
KSRYDGYVTSIAANDEVEDDDVENVPVAQKRAAGYTAPASLLNDIAQSDKDYDPFADKRR
PTIADREDEYRQKRRRMIISPERTDPFAEGGKTPDVGSRTYTEIMKEQYLRAEETELRKK
LLERVREGTLKPIAQSNGEASKPSQQKRKGRWDQSSEETPVIKKTVSATPSSQATPSWDA
ERGAWEETPGAAGRGSETPGATPSARVWDATPGHITPGHATPGRETPAQHTSRRNRWDET
PKTDRETPGHNSGWAETPRTDRGTGVDTIQETPTPSAKRRSRWDETPGATPAAATPTPSH
ATPSHATPSHATPSLATPTPHTPVFTPGGSTPVGVKAMGMATPTPGHVAAMTPEQLQAYR
WEKEIDERNRPYTDEELDAMFPPGYKVLPPPAGYVPIRTPARKLTATPTPLGGTPIGFFM
QTEELGGSAAAAARLLDPQPKGSQQLPFMKPEDAQYFDKLLIDVDEDALSPEELKERKIM
KLLLKIKNGTPPMCKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDR
ILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDID
NIDEYVRNTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCA
ILPHLKSLVEIIEHGLVDEQQKVRTITALASAALAEAATPYGIESFDSVLKPLWKGIRTH
RGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGT
DGVEPQYIMDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRIVDDLK
DDNEQYRKMVMESIEKILANLGAADIDSKLEEALIDGILYAFQEQTTEDVVMLNGFGTIV
NQLGKRVKPYLPQICGIILWRMNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVL
YEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRXRKVQENCIDL
VGRIADRGPEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLL
NNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYI
GEMGKDYIYAVCPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALVHLLNHVWPN
IFETSPHLVQAFMDAVEGMRVALGPVKILQYALQGLFHPARKVRDVYWKIYNTLYIGGQD
ALVAGYPRIQNDPNNHYNRYELDYLL
NT seq 4041 nt   +upstreamnt  +downstreamnt
atgctccttaggttaggtaaaatggacaagatacctagaacacatgaagccattgaagct
caaatcagagaaatacaatctaagaaagcagaacaacctgaaaacgggtcaaataagggt
gtgtctctgggagagacctattatgacagtgacatatacgataatgctggacagggcggc
aagtcccgctacgacggctatgtaacatctattgctgccaatgatgaggttgaagatgat
gatgttgaaaatgtgccagtggcacagaaaagggcggcaggctacacagctcctgcttcg
ttgctgaatgatatagcacagagtgacaaagattatgatccttttgctgacaaacgaagg
cctacaattgcggacagagaagatgaataccgccaaaaaaggcgtaggatgattatatct
cctgagagaactgatccctttgcagaaggtggcaaaactccagatgttggttcaagaacc
tacacagagattatgaaagaacagtatctccgtgctgaagaaactgaattacgaaaaaag
ctattggaaagggtccgtgagggcacccttaaacctatcgcgcaatcaaatggagaggca
tcaaaaccaagtcagcaaaaacgtaaggggcgttgggatcaaagttctgaagagacacct
gttatcaagaagacagtgtctgccactcctagttctcaagcaactccctcatgggatgcg
gagagaggtgcttgggaggaaactccaggcgcagcaggacgtgggagcgagacccctggt
gctacgccttcagcgcgggtgtgggatgctactcctggacatattacaccaggccatgct
acacctggcagagaaacaccagctcagcatacctccaggcggaaccgttgggatgaaacc
ccaaagacggatagagagactcctggacacaatagtgggtgggctgagacaccacgcact
gaccgcggcacaggtgtggatactattcaggaaacaccgacaccttctgcaaagcgccga
tcgcgatgggacgagactccgggcgcaacgccggccgcggccacaccgactccttctcac
gccaccccctcgcacgcgaccccgtcacacgcgacgccttctctggcgacacctacacca
cacacacctgtattcactcctggaggttctacacctgttggtgtaaaggccatgggaatg
gctacaccaacccctggacatgtggcggccatgactccagagcagttgcaagcttatcgc
tgggaaaaagaaatagatgaacgcaacagaccatacacagatgaagaactggatgccatg
ttcccacctgggtacaaggttttgccacctcctgcaggttatgtaccaattcggactccg
gctcgtaagctgaccgcaacccccacacccttgggtggtaccccaatcggctttttcatg
cagacggaggaactgggcgggtccgcggcggccgcagcgcgcctgctcgacccgcagccc
aaaggtagccagcaactgccattcatgaagcctgaagatgctcagtattttgacaaactt
ctcattgacgtcgacgaggatgctctttcccccgaggaactgaaggagaggaagataatg
aagctgctgttgaaaataaagaatggtactccacctatgtgtaaggcagcactacgtcaa
atcacagacaaagctcgggaattcggagctgggccgctgttcaatcaaatattgccattg
cttatgagtcccacacttgaagaccaagagagacatttattggttaaagttattgacaga
attctgtacaaattggatgacttggtccgaccatatgtccataagatattagtcgtcatt
gaaccccttctcattgacgaagattactatgcccgtgtggagggccgtgaaatcatctcc
aatttagccaaagctgctggtctcgccaccatgatctccacaatgagaccagatattgat
aacattgatgaatacgtgcgaaacacaaccgccagagcatttgccgttgttgcgtctgct
ttaggtataccatcactgttgccgtttttgaaagctgtttgtagatcaaagaaatcttgg
caagcaagacacacgggaataaagattgttcaacaaattgctattttaatgggttgtgct
atattgcctcatttaaaatcacttgtggagatcattgaacacggtttagtagatgagcaa
caaaaggtgcgcacaatcacggcgttggcgagtgccgctctcgcagaagccgccacacct
tacggcattgaatccttcgactctgttctgaaaccactgtggaaaggtatccgcacacat
cgtggtaaaggtctggctgcgttcttgaaagcaattggttatctgattccacttatggat
gctgaatatgccaattattataccagggaagtgatgcttatccttattcgagagtttcag
tcgcctgatgaggaaatgaaaaagatcgtattgaaggtagtgaaacagtgctgtggcaca
gatggtgtggagccccagtacattatggatgagatcttgccgcatttcttcaaacatttc
tggaatcatcgcatggcacttgatagacgaaactaccgtcaacttgtagacactacagtc
gaaatcgcaaataaagttggtgcatctgaaatcattaaccgtattgtagacgatttgaaa
gatgacaatgagcaatacagaaagatggtgatggagtcgatagaaaagatactcgcgaat
ttgggtgcggcagatattgattcgaaacttgaggaagcccttattgacgggattttatat
gcattccaagaacagacaacagaggatgtagtcatgttgaatggtttcggtacgatagtc
aatcaactgggaaaacgtgtcaagccatacctgccccagatatgtggtatcattctatgg
agaatgaacaataagtccgccaaagttcgtcagcaagctgctgatcttatttcacgaatt
gctgttgttatgaaaacttgtcaggaggaaaagcttatggggcatcttggcgttgtgctg
tacgagtatttgggtgaggaatatccagaagtgcttgggtcgatacttggagcattgaag
gctatagttaatgtgatcggaatgaccaaaatgacgccaccgattaaagatctccttccc
agactcaccccaattttaaaaaacaggtaacgaaaagtgcaagagaactgcatcgatttg
gtcgggcgtatagctgacaggggtcctgagtttgtgtctgctagggaatggatgagaata
tgtttcgaactgctcgagctcctaaaagcgcacaaaaaagctataagacgagcgaccgta
aatacatttggttatatagctaaagccatcggtcctcatgatgtgctagcaacattactc
aacaatttgaaagtacaagagagacaaaacagagtttgtactactgtggctattgctatc
gtagccgagacttgttcaccgtttaccgttttaccagcgttaatgaatgaatatcgggtc
ccagaactcaatgtacaaaatggagtgctcaaatcgctgtcatttttgttcgagtatatc
ggcgaaatggggaaggattacatttacgccgtgtgtccactccttgaagatgctttaatg
gacagagatctagtgcacagacagaccgcgtgtgctgcaattaagcatatggctctcggt
gtatacggatttggatgtgaagatgcgcttgtacatttgttaaaccatgtgtggcccaat
atttttgaaacatcaccacatttagtgcaagctttcatggatgcagttgagggtatgaga
gtggcgcttggtcctgtcaaaatactccagtatgcactgcaggggttattccatcctgca
aggaaagttcgcgatgtgtattggaaaatttacaacaccctatacattggcgggcaagat
gcactggttgccggatatccgagaatacagaatgatccaaataaccactataacagatat
gagctggactacttactatga

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