Manduca sexta (tobacco hornworm): 115449549
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Entry
115449549 CDS
T07401
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115449549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115449549
03009 Ribosome biogenesis [BR:
msex03009
]
115449549
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115449549
Spliceosome [BR:
msex03041
]
Complex A
U1 snRNP components
U1 related factors
115449549
Complex B
115449549
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
Pre-60S particles
Helicases
115449549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
115449549
NCBI-ProteinID:
XP_030033263
LinkDB
All DBs
Position
15:complement(1250065..1258802)
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AA seq
658 aa
AA seq
DB search
MYEDRRGGRGGGRGGRGGSRGGRSNDRSQERGTSRFSGGRGRDGPRGRDGGRGGRGFSSR
GGRDEYRSNFKNDQPGGNLRKIRWDNVVLTPFQKNFYVPHPNVQRRSQAEIEAYRSQHQI
TVKGRDVPAPSIYFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVGIAQTGS
GKTLAYILPAIVHIINQPRLLRDEGPIVLVLAPTRELAQQIQQVATDFGQNVMVRNTCIF
GGAPKGPQGRCLERGVEIVIATPGRLIDFLEKDTTNLRRCTYLVLDEADRMLDMGFEPQI
RKIIEQIRPDRQVLMWSATWPKEVQNLAEEFLHDYIQINIGSLGLAANHNILQIVDVCEE
WEKNDKLITLLTEISSEEETKTIIFAETKRRVDEIARAIGREGWRALAIHGDKNQHDRDH
VLQHFRNARGAILVATDVAARGLDVEDVKFVINYDYPNNSEDYVHRIGRTGRSQNTGTAY
TLFTPNNAAKAKDLMSVLQEANQVVNPKLLELAQCGMGFKGKYGRNRYRDRDESSSRSER
GSRGRGRGGRFGDRGGSRWDNSSDNYNDNQNSYDRPDFGNRQNFGNRDNTGFRQDNGFRG
RGGRGGRGRGGSSFNSQQEFQGNNQNYQQPQNFTAPPTNYYNMYSQPPPPPASKFGAK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggatagacgtggaggacgaggtggtggacgcggtggaagaggcgggagccgc
ggtggcagatccaacgatagatcgcaagaacggggcactagcagattcagcggcgggcgc
ggccgagacgggccgcggggtcgcgacggaggccgaggtggccgggggttcagcagccgc
ggcggccgtgacgaataccgcagcaactttaaaaacgatcagcccggcggcaacctccgc
aagatacgctgggacaatgttgttcttacgccgttccaaaagaatttctatgtcccgcat
ccgaatgtacagcgccgcagccaggcggagatcgaggcgtaccgcagccagcatcagatc
acggtgaagggtcgcgacgttcccgctccgagcatttacttcgaggaaggaggctttccc
gattacgccatgaaagagattcttaagcagggtttcccgaacccgactcctatccaagct
caagggtggcctattgccttatctgggagagacatggtcggcatcgcccaaactgggtcg
ggtaaaaccctggcgtacatactacctgctatcgtgcatatcatcaaccagccgcgactt
ctccgcgacgagggtcccatagtcctggttttggcaccaacgagggagctggcgcagcag
atccaacaggtcgcgacggactttggtcagaatgtgatggtgcgcaacacttgcatcttc
ggcggcgcacccaaggggccccagggaaggtgtctcgagaggggagtggagatcgtcatt
gcaacccctggaaggcttattgacttccttgagaaagatacgacaaacctgcgtcgctgc
acgtacctggtcctcgacgaagctgacaggatgctcgacatgggctttgagcctcagatt
cggaagatcatagagcagatcaggcctgacagacaggtgctcatgtggtcagcaacctgg
ccaaaagaagtccagaatctagcagaagagtttctccatgactatattcagatcaacata
ggttcactgggcttggcagccaatcacaacatcttgcagatcgtagatgtctgtgaggag
tgggagaaaaatgacaagctcattacattactcactgagatctcatcagaagaagaaacc
aagactattatatttgctgagactaagcgcagggtggacgagatagcgcgcgcgatcggt
cgcgagggctggcgagcgctggccatccacggagacaagaaccagcacgaccgcgaccac
gtgttgcaacatttccgcaacgcgcgcggcgccatactagtcgccaccgacgtcgccgcc
cgcgggctcgatgtggaggacgtgaagttcgtaataaattatgactatcccaataactct
gaggactatgtgcaccgcatcggtcgtacgggacgttcgcagaacaccggcacagcgtac
actctcttcactccgaataatgccgccaaggcgaaagacttgatgtcagtgctgcaagaa
gccaaccaagtggtgaaccccaaactgctggagttggcgcagtgtggtatgggattcaag
ggaaaatacggccgcaaccggtaccgcgacagggacgagagcagctcccgctcggagcga
ggctctcgcggcagaggcaggggaggacgcttcggagacaggggaggttctagatgggac
aattcaagtgacaactacaacgacaatcagaactcgtacgaccgccctgacttcggcaac
cgacagaacttcggcaacagggacaacacgggcttcagacaggacaacgggttcagggga
cgcggtggcaggggcggcaggggcaggggaggctccagcttcaactcgcagcaggagttc
caggggaacaaccagaactatcaacaacctcagaacttcaccgcaccaccgactaactac
tataacatgtattcccaacctccgccgccgcccgccagtaaattcggggccaagtag
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