Manduca sexta (tobacco hornworm): 115449964
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Entry
115449964 CDS
T07401
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03013
Nucleocytoplasmic transport
msex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115449964
03015 mRNA surveillance pathway
115449964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115449964
03041 Spliceosome [BR:
msex03041
]
115449964
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115449964
Spliceosome [BR:
msex03041
]
Complex C
Other components
EJC/TREX
115449964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
RSB_motif
Motif
Other DBs
NCBI-GeneID:
115449964
NCBI-ProteinID:
XP_037294169
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All DBs
Position
13:7565473..7568960
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AA seq
401 aa
AA seq
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MGTEVAISFSALRAQLENEKSTLYKIDENIKKIVQTTGRFNNDRFNQSGDYARSGNRLGG
RPPYPAENANNYKNEEHFNKRKETKTVFSRLSARVNDSDGEEEGPGNKRARVPSAVCREL
PTRAAVLRAQGDDEQARTRNRRIFGSLLGTLQKFKQEEIVLQTKEDKRAQVERKIEEQAR
QEKEREQKERKTLFAEREHKKATIKALEAKMGRVQEFENWELSQKHLSNFILTKSKPHIY
WLPKKMNDKANEKLVASRKFHEKFMTKKRQELQEELVKIEQRCLRIQRPGTKENDPEPED
KPIENQDEDVEMKDGEKRKRDKFAADADVHDESDGDAPDEHNEVQPKEEETVAEESVMDE
NIEKTETMEVENVVENTDTTEAVSEPQIEQKDEEQELEHSQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggggacagaagtggcaatatcatttagtgcattacgtgctcaattagaaaatgaaaag
agcacattgtataaaatagatgaaaacataaaaaagattgtacaaacgacaggacgtttc
aataatgatagatttaatcaatccggggattacgctaggagtggtaatcggttaggcggc
cgtccgccatacccggctgaaaatgcaaataactacaaaaatgaagaacattttaacaaa
cgcaaggaaactaaaacggtttttagcaggctatcagctcgggtaaatgacagcgacggg
gaggaagagggaccaggtaataagcgtgccagggtgccgtctgcagtatgtagagagcta
cccactagagcagctgtgcttcgagcacagggggatgacgagcaggccagaacacgcaac
agacgtatctttggatcactgttgggtacattgcagaaattcaaacaagaagaaattgtt
ttacaaacaaaggaagataagagagcacaagtagagcgaaaaatagaagaacaggcacgc
caagagaaagagagagaacagaaagaacgcaagacattattcgctgaacgggaacacaag
aaagccactataaaagcactagaggccaagatggggcgtgtgcaagagtttgagaactgg
gagctctcacagaaacacttaagtaactttatactaactaaaagcaagccacacatctac
tggttacctaagaaaatgaatgataaagcaaatgagaagttagtggctagcagaaaattc
catgaaaagttcatgaccaaaaagcgtcaagaactgcaagaagaattagtaaagattgag
cagcgttgtctccgaattcaaaggcctggcacgaaagagaacgacccagagccggaagac
aaacctatcgaaaaccaagatgaagacgttgaaatgaaagatggagagaaacgcaagagg
gataagtttgcagccgatgcggatgttcatgatgagagtgatggtgatgcgcctgatgaa
cacaatgaggttcagccgaaggaagaggagacagtggcagaagaaagtgttatggatgaa
aatattgagaaaacagagactatggaagtggaaaatgttgtagaaaatactgatactact
gaagctgttagtgagccacaaatagagcagaaggatgaggaacaggagctcgagcattcc
caataa
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