Manduca sexta (tobacco hornworm): 115450233 Help Entry 115450233         CDS       T07401                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism msex  Manduca sexta (tobacco hornworm) Pathway msex03030   DNA replication msex03410   Base excision repair msex03420   Nucleotide excision repair msex03430   Mismatch repair Brite KEGG Orthology (KO) [BR:msex00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     115450233    03410 Base excision repair     115450233    03420 Nucleotide excision repair     115450233    03430 Mismatch repair     115450233  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:msex03032]     115450233    03400 DNA repair and recombination proteins [BR:msex03400]     115450233 Enzymes [BR:msex01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      115450233     6.5.1.6  DNA ligase (ATP or NAD+)      115450233     6.5.1.7  DNA ligase (ATP, ADP or GTP)      115450233 DNA replication proteins [BR:msex03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     115450233  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      115450233 DNA repair and recombination proteins [BR:msex03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      115450233    NER (nucleotide excision repair)     Other NER factors      115450233    MMR (mismatch excision repair)     Other MMR factors      115450233 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  115450233 NCBI-ProteinID:  XP_030034090 LinkDB All DBs Position 4:1600774..1611116 Genome browser AA seq 962 aa AA seqDB search MNNIVKFTPRLVYKTLASNTYKIHIFKNIYTVNPCAVLERTMAQKTIRSFFKLTPPKPAR GSPATDGLTSPKPEVEKEEKPSSKRQRLDSSDSDSVSPKTPTQKKKRQRIYSSSSESQSP KKVAESPVKNESPNKTNVEVIKSELNASYVESTVKKENNVKKYESPKAKKQTAEKVLKES NRTSPKEKNSMKSFLTQVKKEPSEEEVEPKVEKKNEKPKEFFKLIKKENKEEKEGAEESK LVPEAEYNPGKAKYHPIKDACWSKGQEVPYIALARTLEVIEGTSARLKMIEILSNYFRSV IVLTPEDLLPSVYMCLNQLAPAYHSLELGIAETYLMKAVGQCTGRSLAHVRAAARRAGDL GAAAQAARDAQRTMFAAPHLRLRRVFQALQDIARMTGQASVNKKINKIQSLFVACRHSEA KYLIRSLEGKLRVGLAEQSALHALGLAAATTPPHKGGEILDASKDMTPEQFKSHVEAHVL AVKTAYCECPDYGRVVAALLAGGPAALAARCVLTPGVPLKPMLAHPTRGVHEIFNRFEGC EFTCEWKYDGERAQIHVPSIARHTTAPDTTPETKSDTAKDTTSETKPDTASDTTSETKPD SASDTASETKPDTASDTVPQLAPDLAHASVFSRNQENNTTKYPDIIRRLPSLLGPDVHSC VLDCEAVAYDVVNKQILPFQILSTRKRKDASEAEIKVQVCVFVFDLLFLNGRALVREPLH SRRQLLRTHFHEVEGEWQFATSKDCTSMEEVQQFLEEAVHGSCEGLMVKSLKGPTAYYDI ARRSKNWLKLKKDYLEGVGDTIDAVVLGAYHGRGKRAGVYGGFLLACYDPAADEYQALCK IGTGFSDQQLAELAEKLKPHLIDAPRSYYRFDRSHAAEAWAEARVVLEVRCADLSLSPAH AAARGLVDAHKGVSLRFPRLVRIRDDKTGEQATTAQQIADMYLAQDQVKNQPKQAVDLDD FY NT seq 2889 nt NT seq  +upstreamnt  +downstreamnt atgaacaatatcgtaaaattcacacctagattagtttacaaaactcttgctagcaataca tataagatacatatattcaaaaacatatacacagtgaatccatgtgctgtacttgaaaga actatggcacaaaagactataagatcatttttcaaattgactccacctaaaccagcgagg ggatcacctgcaactgatggactcacctcaccaaaaccagaagtagaaaaggaagagaag ccatcatcaaaaaggcagcgtttagacagcagtgacagtgactctgtgtcaccaaagaca ccaacacaaaagaaaaaacgacagcgcatttacagttccagcagtgaatctcaatctcct aagaaagtagcagaaagtccagttaaaaatgaatcgccaaacaaaacaaatgttgaagtt ataaaatcagaactcaacgcatcttatgtggaaagtacagttaaaaaggaaaacaatgtt aaaaagtatgaatcgccaaaagcaaaaaaacaaactgctgaaaaagttttaaaagaaagc aataggacatctccaaaagagaaaaactctatgaagtcatttttgactcaagtaaagaag gaaccatcagaagaggaagtagaacctaaagttgaaaaaaagaatgagaaacccaaggaa ttcttcaaacttattaagaaagagaacaaagaagagaaagaaggtgctgaagaatctaaa ctagttccagaggcagaatacaaccctggcaaagccaagtaccaccccataaaggatgca tgctggtccaaaggccaggaggtgccgtacatcgcgctggcgcggaccctggaggtcatc gagggtacctcggcgaggctgaagatgatcgaaatcctgagcaattacttcagatcggtg atagttctcacgcccgaagatctgttgccgagtgtgtacatgtgtctcaaccagctggcg cccgcgtatcacagcttggagttgggcatagcggagacgtacctaatgaaagcggtgggc cagtgcacggggcgctcgctggcgcacgtgcgcgcggcggcgcggcgcgcgggcgacctc ggcgcggcggcgcaggcggcgcgcgacgcgcagcgcaccatgttcgccgcgccgcatctg cgcctgcgccgcgtcttccaggccttacaggacatcgcgcgtatgaccggtcaggcatcg gtaaacaagaaaatcaataaaatacaatctttatttgttgcgtgcagacattcagaagcg aaatatttgataaggtcgttggagggcaagttgcgcgtgggcctggcggagcagtctgca ctgcacgcgctggggctcgcggcggccaccaccccaccacataaagggggcgaaatactc gacgcctccaaggacatgacaccggaacagttcaagtcgcacgtggaggcgcacgtgctg gcggtgaagacggcgtactgcgagtgcccggactacgggcgcgtggtggcggcgctgctg gcgggcgggccggcggcgctggcggcgcgctgcgtgctgacgccgggcgtgccgctcaag cccatgctggcgcaccccacgcgcggcgtgcacgagatattcaacaggttcgaaggttgt gagttcacgtgtgagtggaagtatgacggcgagcgcgcgcagatccacgtgccgagcata gctaggcacactaccgcgccagacaccacaccagaaactaagtctgacactgcaaaggac accacgtcagaaactaagcctgacactgcgtcagacaccacatcagaaactaagcctgac agtgcatcagacaccgcgtcagaaactaagcctgatactgcgtcagacactgtgccacag ctcgcgccagacctcgcgcacgcaagcgtgttcagccgaaaccaagagaacaataccact aaatacccggatataatccgtcgtctgccgtcgctgctgggccccgacgtgcacagctgc gtgctggactgcgaggccgtcgcgtacgacgtcgtcaacaaacagatattgccattccag atcctgtcgacgcgcaagcgcaaagacgcgtccgaggcggagatcaaggtgcaggtgtgc gtgttcgtgttcgacctgctgttcctcaacggccgcgcgctcgtccgcgagccgctgcac tcgcggcgacagctgctccgcacacacttccacgaggtcgagggcgagtggcagttcgcg acgtcaaaggactgtaccagtatggaggaggtgcagcagttcctggaggaggcggtgcac ggctcgtgcgagggactcatggttaagtcgctgaaagggcccaccgcttactacgacatc gccagaaggtccaagaactggctcaagctgaagaaggactacctggagggcgtgggcgac acgatcgacgcggtggtgctgggcgcgtaccacggccgcggcaagagagccggcgtgtac ggcggcttcctgctcgcctgctacgaccccgccgccgacgagtaccaggcgctctgcaag atcggcaccggcttcagcgaccagcagctcgcagagctggcggagaaactaaagccgcat ctcatcgacgcgccccgatcgtattataggttcgaccgctcgcacgcggcggaggcgtgg gcggaggcgcgcgtggtgctggaggtgcgctgcgcggacctgtcgctgtcgccggcgcac gcggcggcgcgcgggctcgtggacgcgcacaagggcgtgtcgctgcgcttccccagactg gtgcgcatccgcgacgacaagaccggcgagcaggcgaccacggcgcagcagatcgccgac atgtaccttgcgcaggaccaggtcaagaaccagcccaagcaggccgtggacctcgacgac ttctactaa

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