KEGG   Manduca sexta (tobacco hornworm): 115450286
Entry
115450286         CDS       T07401                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115450286
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msex03041]
    115450286
Spliceosome [BR:msex03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    115450286
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 115450286
NCBI-ProteinID: XP_030034146
LinkDB
Position
5:6129516..6131675
AA seq 302 aa
MANRTVKDAKSIRGTNPQYLIEKIIRSRIYDSKYWKEECFALTAELLVDKAMELRYIGGV
HGGFIYPTPFLCLVLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYMRLTGTSVDCYKYL
EPLYNDNRKLRRQTREGQFEIVHVDEFIDELLREERLCDIILPRIQKRPILEENNELEPK
VSALDDDLDEEMASDEDNADPDSKENKRDKERRDRDRRRERSRDRERREKDRKRDRSRSR
DRDRRRDREREREREREKEREREREKERDRERLREQRERDREKERRDRDRHEADRRRDRG
RY
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcgaaccgcacggtgaaagacgcgaaatctattcgcggtacaaatccacaatatctt
atagagaagattataagatcacgtatatacgactctaaatactggaaagaagaatgtttt
gccttaaccgcggagttgttggtagacaaagccatggaattgcggtatataggtggagtg
cacggtggcttcatatatcccactccattcctctgtttagtgttaaaaatgcttcagata
cagccagaaaaggatattgtcgtagagtttatcaaaaatgaagagttcaagtacgtgcgc
gcgctcggtgctttttatatgaggttaactggtacttcagtagactgttataaatacttg
gagcctctgtacaacgacaacagaaaactaaggcgacaaactcgcgagggccagtttgaa
atagtccatgtggatgagtttatcgatgaattgcttcgggaagagcgtttgtgtgacatc
atattgccgcgaatacaaaagcggccaattttggaagagaacaacgagctggagcccaaa
gtgtctgctttagacgacgatttggatgaagagatggcttctgatgaagataacgctgat
cctgatagtaaagagaacaagcgcgataaagaaaggagggaccgcgaccgcaggagggag
agatcgagagaccgtgaaagacgcgaaaaggacagaaaacgggatcgctccagaagtaga
gacagagataggcggcgcgacagagaacgggagagggaaagggagagagagaaggaacga
gaacgggagcgtgagaaggaaagagatagagaacgactcagggaacagagggagcgggac
agagaaaaggaacgcagagatagagacagacatgaagcagacaggcgtagagacaggggt
agatattag

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