Manduca sexta (tobacco hornworm): 115450492
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Entry
115450492 CDS
T07401
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03008
Ribosome biogenesis in eukaryotes
msex03013
Nucleocytoplasmic transport
msex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115450492
03015 mRNA surveillance pathway
115450492
03008 Ribosome biogenesis in eukaryotes
115450492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115450492
03009 Ribosome biogenesis [BR:
msex03009
]
115450492
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115450492
mRNA cycle factors
Stress granule specific factors
115450492
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
115450492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
115450492
NCBI-ProteinID:
XP_037293338
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All DBs
Position
11:3598358..3609995
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AA seq
623 aa
AA seq
DB search
MPKRGGGPRHRNWKGDNDHFDHDDRVQSNSTRRVSFKPTSKGKNKIRTWNDPKLLLDDDI
DMGATSGQGQYRKSAFRGRGGRMNSPAPRAHHGVVKKKFIAGILPWYQIIIPYGAKHEKE
VVLRSLLSFISPEIFIPHYYKTNGNAAVFYVDDVKIAERLYHADRKITMSDGFKLVVIVR
NAVPNITIDADMKEKMKLTMAKRYNAATKALDLTKFHADPDLTDIFCALFRPMIMLAAID
IIAENIPDLEALNLNDNKLHGLEHLKILSSKFKNLKILYMGDNRIPFLGSLDPLKSLPLV
ELYLKGNPLVNRFHDHEIYISDVRKKFPKLMKLDGADLPPAIGFDVSEDLSLPPRQQSFL
VDPAGQDLVREFLTQYFAIFDSESRQALLEAYHENASLSMASNYLSNDSRNSPNNRLTSY
ISNSRNIMRVTDREQRRRYLRTGRLQVVSFLSDLPKTTHDLMGFAVDLIVFTPAMIVLTM
NGIYKETNTAGNPTRSFHRTFVIVPNTSGGFCVINDMLYVTNTTKEQEEKAFASGSVEPT
PAAPAPGPAPGAVPGVAPGVAAGAAPDDAHKMQLLAMLSQQTGMNEHWSVNCLQETCWDL
QRAVFIFNQLQSEGKIPPEAFVK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgtggaggtggcccaaggcaccgtaattggaagggtgacaatgatcatttt
gatcatgatgaccgcgttcagagcaactcaacaagacgtgttagcttcaagccaacaagt
aaaggcaaaaacaagattcgcacatggaacgatcccaaactattacttgacgatgatatt
gacatgggtgccacgagcggtcaaggacagtatcggaaaagcgctttcagggggcgtgga
ggccgtatgaactcaccagccccaagagcccatcatggagtagttaaaaagaagttcatt
gctggtatactcccttggtaccaaattataattccatatggagctaaacatgagaaagag
gtggtattacggtcattgctgagttttatatcacctgagatcttcattccacattactac
aagaccaatggcaatgctgccgtgttttatgtggatgatgtcaaaatcgccgagagactg
tatcatgcagacagaaaaattacaatgtctgatggtttcaagcttgtggtgattgtgaga
aacgcagtaccgaatatcacaatagatgctgatatgaaggagaagatgaaactgacaatg
gctaaaagatacaatgctgcaactaaagcattagatttgacaaaatttcatgctgatcca
gatttaacagacatattctgcgcattgttccgtccaatgattatgttggctgccattgac
ataatcgctgagaacatccctgatcttgaagctctcaacctcaatgacaataagctgcat
ggactcgagcacctcaagatattgtcctccaagttcaagaatctgaaaatcttatacatg
ggtgacaacaggataccattcctcggctcactggacccactgaagtcactgcccctcgtt
gagctgtacctcaagggaaatcctttggtgaacaggtttcatgatcacgaaatatatatc
agcgatgtgcggaagaagttccccaagctgatgaaattagacggtgccgacctacctcca
gccattggtttcgacgtgtcagaagacctttcgctgcccccccgacagcagtcgttccta
gtggacccggcgggccaggacctcgtacgagagttcctcactcagtacttcgcaatattc
gactctgagtcccgccaggcattgcttgaggcgtaccatgaaaacgcaagcctctcaatg
gcttctaattacttaagcaatgatagcagaaattcacctaataacagactaacatcatac
atatcaaacagccggaacataatgcgtgtaacagacagggaacagaggaggcgttactta
cgcacgggaagattacaagtcgtatcgttcctgtcggacctgcctaaaaccacgcatgat
cttatgggctttgcggttgatctcattgtgtttacgcccgctatgatagttctgacgatg
aacggcatatacaaagagacgaataccgctggtaacccgacgcgctccttccaccgcacg
ttcgtcatcgtgcccaacactagcggtggcttctgcgtcatcaacgacatgctgtatgtc
accaacaccaccaaggaacaggaagagaaagcattcgcgtctggttcagtggagccgacg
ccggctgcgcctgcgccggggcccgcgccgggcgccgtgccgggcgtggcgccgggcgtg
gcggcgggcgctgcgccggacgacgcgcacaagatgcagctgctcgccatgctcagccag
cagaccggcatgaacgaacactggagcgtcaactgccttcaagaaacatgctgggacctc
caaagagcggtcttcatcttcaatcaactccaatcagaagggaagataccaccagaagca
tttgttaaatga
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