Manduca sexta (tobacco hornworm): 115450994
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Entry
115450994 CDS
T07401
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115450994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115450994
03009 Ribosome biogenesis [BR:
msex03009
]
115450994
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115450994
Spliceosome [BR:
msex03041
]
Complex A
U2 snRNP components
U2 related factors
115450994
Complex B
115450994
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
115450994
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
90S particles
Helicases
115450994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
ABC_tran
Flavi_DEAD
T2SSE
AAA_25
Motif
Other DBs
NCBI-GeneID:
115450994
NCBI-ProteinID:
XP_030035039
LinkDB
All DBs
Position
26:4584093..4591458
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AA seq
736 aa
AA seq
DB search
MSKRRIEVLDPFIKRKREEKAAAAAKSGSSGESSDTTLATLGTSMPPTATSTPGVNPFTS
LPLSQRYHELLRRRLGLPVWEYKNDFMRLLNTHQCVVLVGETGSGKTTQIPQWSVEFAAV
TLGKSKGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGM
LLREAMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRSDLKLVIMSATLDAGKF
QQYFDNAPLMNIPGRTHPVEIFYTPQPERDYLEAAIRTVVQIHMCEEIAGDILLFLTGQE
EIEDACKRIKREIDNLASDAGELKCIPLYSTLPPNLQQRIFEPAPPNRPNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKHEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCF
VRPNEARKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNV
RQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTVKDNQVVQ
LHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELNNFPQCEARRQL
ELLQARLDSKAYQEGF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacggagaattgaagttttggatccctttatcaaaaggaaaagggaggagaaa
gcagccgctgctgccaagtctgggagcagcggtgagtcctccgatacaactctcgccact
ctcggcaccagtatgcctcccacggcgaccagcacacccggagttaacccattcacaagt
cttcccctgtcacaacgctaccatgaactccttcgacgccgtcttggtctccctgtttgg
gaatataagaatgattttatgagactactaaatactcaccaatgtgtggtccttgtggga
gaaactggttctggaaaaaccactcagataccgcagtggtctgtggaatttgccgcagta
acacttggcaagtcgaaaggcgttgcttgcacacagcccaggcgagtggcagcgatgtct
gtggcacagcgcgtcgcggaggaaatggatgtggcattgggtcagcaagttggctacagt
atacgttttgaagattgttctggcccacaaactgttctgaagtacatgactgacggtatg
ttgcttcgcgaggccatgtcagaccccatgctagaacaatacagagtcatacttctagat
gaggcccacgaaagaacgctagctacggatattttgatgggtgtgcttaaagaagttata
aaacaacgatcagatttgaaacttgttattatgtcagcgacactcgatgctggcaaattc
cagcagtactttgacaatgcaccattaatgaacattcctggtcgtacgcatccagtagag
atattctatacgccgcagcctgaacgcgactatttggaggctgctatacgtaccgtggtc
cagatacacatgtgtgaagagattgcaggagatatattactgttcctcacgggacaagag
gagattgaggatgcctgcaaaagaattaaacgcgaaatagacaatttagcgtcagatgct
ggcgagttaaagtgtattccattatattcaaccctaccaccgaatttacaacaaaggata
tttgagccagcgccgccaaatagacccaatggtgccataggccgtaaagtagtggtttct
acgaacatagcagaaacatcgttgacaatagatggtgtagtcttcgtgatagatccaggt
ttcgccaaacaaaaagtgtacaaccctcgtataagagtagagtccctgttggtctcgccc
ataagcaaggcgtcggcgcagcaaagagccggccgtgctggaagaacgcggcctgggaag
tgtttccgactctacacagagaaggcatacaaacatgaaatgcaagacaacacttatccg
gaaattttgagatcaaatttaggatctgtagttttgcagttgaaaaagctgggtatcgac
gacttggtgcactttgacttcatggatccgcccgcgccggagacactcatgcgggcgctc
gaactgcttaactacctggcggcgcttgacgacgatggcaacctgacggacctcggcgcc
gtgatggcggagttcccgctcgatccacagctcgccaagatgttaatcgcgagctgcaac
cacaactgctccaatgagatcctctccatcacagctatgttatctgtgccacagtgtttc
gtgaggccgaacgaagctaggaaggcggcggacgaagccaaaatgcgttttgcacacatt
gacggcgaccacctcacgttgctcaacgtataccacgcattcaaacagaatatggaagac
ccgcactggtgttacgacaactttataaactacagatcactgaaatcaggcgacaatgta
cgacaacagctcagcagaatcatggacaggttcaatttgaagagaactagcacagagttt
actagcaaagattattacattaacataaggaaggcactcgtcaatggattcttcatgcag
gtggcacatttggagcgcactggccactacctgacagttaaagacaaccaagtggttcaa
ctgcacccgtccacgtgcctcgaccacaagcccgactgggtcatatacaacgagttcgtg
ctcaccaccaagaattacatacgcaccgtcacagatatcaagccggaatggctgctgaag
attgcaccgcaatactacgagctgaacaacttcccgcagtgcgaggcgcgacgtcaacta
gagctgctgcaggcgcgcctcgattctaaggcctaccaggagggcttctag
DBGET
integrated database retrieval system
