KEGG   Manduca sexta (tobacco hornworm): 115451098
Entry
115451098         CDS       T07401                                 
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    115451098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msex03009]
    115451098
Ribosome biogenesis [BR:msex03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    115451098
SSDB
Motif
Pfam: EloA-BP1
Other DBs
NCBI-GeneID: 115451098
NCBI-ProteinID: XP_030035162
LinkDB
Position
6:5858561..5862235
AA seq 1094 aa
MLPSTGYFKGYNCPFYDGGLCERPYCHFRHVKRDSQSVSDGVESGTILQKLVSAEVKKIL
QQTEASGSATAVEIPSVNVDASSASNVVQSNSKVIYNPTPISELNKINNTDSDSNEDVEQ
RKRHIPVPYTPRKPVGMPLRRPVETNGSSKPFIYIPPTVKYTPGSAENVQCDVYSPSGGT
ESNEKYIPGSEIELQEYKPNDTSENVAGRRNYIPSDKNDSKKKVLEYKPIKVPTKTKLPS
VTYQPTPRSLAPCFSSDEDEPDVKKRKLSNDLNGLDDLGPEFDILDQILDEEKQEHDDTS
DSKRKTESSQPQKHDKDKVKETKEEVKQQNKVECKEHKDKDSHKNSKADKKGTSKDHKSR
SHKIDKSTSKDKEKEEKSKSTDRKSSHKSSHKDRDKDKSKHKNKNDREKHSDKSKSKDKH
SDKSKSSKSSDKHSNRTSSKESTSSKSSSKTDHRKSHRNSKDSKDKHKTKTTNTRDLSDN
DNAAPACEIEDESYISESDEEAIALECKKIFEEYVPIEKPKVVEDPHQMEDAQEEEYLPG
KKRIARGADKKIIRNLPLKRENKPSAAQVMAERLAKVKEFHTTKNSSLSTTTGEYSPQKL
DSVKCPFNVPSSGGTKLRIAHVPYASTLVNAKKLIPPNQNKSNCEASTSSMSTNSTVVQT
VKKGVQRVAHIPNEKFIDRPGILEALGSKIPANIRSKYLNMMIDECLKLYVTATDAYSRA
QHEELATSKKCNTVPIYKNSAVLTVSRLRKELLECNGVKKSGSDSSTLARTPGGKAIETG
SWSIENKNRKTIDNHEFSGSKLYNNIQKWILTEEQLQQNGYPRPHQSGEKGRAIIYGQNK
QKPPKGLIRTCCRCKKDYSVDKKGFPALKEECIYHPNNKYRMRGEVRYQCCSQDGSSDGC
CVAPSHVYEFVDYDNLRGYVKTLPPDTFKDDYGVYSLDCEMCYTTHGLDLTRLTVINSAC
KVVYETLIKPMHPIIDYNTRFSGITEEQMAEVKTSLLEVQATLLTMFSSKTILIGHSLES
DFKALKLIHDTVIDTSVLFPHKMGPPYKRALRNLSSEYLKKIIQNSVDGHNSAEDATVCM
ELIHYKLKEDLKTR
NT seq 3285 nt   +upstreamnt  +downstreamnt
atgcttccttcaacgggttattttaaaggatataattgccctttttatgacggtggcttg
tgtgaaagaccttattgtcattttcgtcacgtaaaaagagattcacaaagtgttagtgat
ggtgtcgagagtggaactattttacagaaacttgtttcagccgaagttaaaaaaattcta
caacaaacagaagcgtctggatcggctacagctgtagagattcctagtgttaatgtggat
gccagtagcgcctcaaacgtcgttcaaagtaactcaaaggtcatatacaatcctacacca
atatcagaattaaacaaaatcaacaatacagattcagacagcaatgaagatgttgaacaa
agaaagcgtcacataccagtgccttatactccaaggaaaccggttggtatgcctttacga
aggcctgtggaaaccaatggttcatcaaagcctttcatttacatacctccaacagttaaa
tacacgcccggcagtgcagaaaatgtacaatgtgatgtatattccccatcaggtggtact
gagtctaatgaaaaatatatccctggctctgagatagaattgcaagaatacaaaccaaat
gacacaagtgagaatgttgctgggaggagaaattatattccatcagacaagaatgatagc
aagaaaaaagtactagaatataagcctataaaagttccaacaaaaacaaaattgcctagt
gtaacataccaaccaactcctagatctctggcaccatgtttttctagtgatgaagatgaa
cctgatgtcaaaaagaggaagttgtctaatgatctcaatggattagatgacctgggacca
gaatttgatattttggaccaaatattggacgaggaaaaacaagaacatgatgatacaagt
gatagtaaaagaaaaacagagagtagccagccacaaaaacatgataaagacaaggtgaaa
gaaactaaagaagaagtaaaacaacaaaacaaagtagaatgtaaggaacacaaagataag
gactcacataaaaactcaaaggctgacaaaaagggtactagtaaagatcataaaagtaga
tcacataagattgataaatctacctcaaaagataaggaaaaggaagaaaaatcgaaaagt
accgacaggaaatcaagtcataagagttctcataaagatagagataaggataaaagtaag
cataaaaataaaaatgatagagaaaagcattcagataaaagtaaatctaaagacaagcat
tcagataagagtaaatccagtaagagctcagataaacattctaatagaacttcatccaaa
gaatctacaagttccaaaagtagcagtaaaactgatcataggaaaagccatagaaattcc
aaagactccaaagataaacacaaaactaaaacaacaaatacccgagatctgtctgataat
gacaatgcagcacctgcttgtgaaattgaggatgaatcatatatatcagagtcagatgaa
gaagcaatagctttagagtgtaaaaagatttttgaagagtatgtacctattgaaaagcca
aaagtagtagaagacccacatcaaatggaagatgcacaggaagaggaatatttaccaggt
aaaaagagaatagcaaggggggcagataagaaaataattcgtaatctacctttaaaacga
gagaataaaccaagtgcagctcaagtcatggcagaaagattagctaaggttaaggagttt
catacgacaaaaaattcatcactttctactactactggtgaatattcacctcagaagtta
gattcagttaaatgtccatttaatgttccaagttctggtggtactaaactccgtattgct
catgtgccatatgcatctacactggtaaatgcaaaaaaattaattcctccaaatcaaaat
aaatcaaactgtgaagcatcaactagttctatgtctacaaactctacagttgtacaaaca
gtaaaaaaaggtgtacaacgagtagctcacatccctaatgaaaaattcatagatagacca
ggtatattagaagcattgggctcaaagattccggccaatataagatcaaaatatttaaat
atgatgatagatgaatgtttgaaattatatgttactgcaacagatgcttattctagagca
caacatgaagaactggctacaagtaaaaaatgtaacactgtgccaatatataaaaattct
gccgtattaactgttagtagactgagaaaagaattactagaatgtaatggtgttaaaaaa
tctggttcagattcatctacattggcaagaaccccaggtggaaaagctattgaaactggt
tcatggagtatagagaataaaaataggaaaactatagataatcatgagtttagtggctcc
aaattgtacaataacatacaaaagtggatattaactgaggaacagttgcagcaaaatgga
tatcctagacctcaccaaagtggtgaaaaagggagagctataatatatggacaaaacaag
caaaaacctcccaaaggtttaattagaacttgttgtagatgtaaaaaagactattcagtt
gataaaaaaggttttccagctcttaaggaagaatgtatttatcatccaaataacaaatat
agaatgcgtggtgaagtccgatatcagtgctgcagtcaagatgggtcatctgatggttgc
tgtgttgcccctagccatgtttacgagtttgtagattatgataatttgagaggatatgtt
aaaacattacctcctgatacatttaaagatgattatggtgtttattctttagattgtgaa
atgtgttatacaacacatggtttagatttgactaggctcacagtcatcaactctgcttgc
aaagtagtttatgaaacccttataaagcctatgcatccaataattgactacaatacaaga
ttttcaggtataacagaggaacagatggcagaagttaaaacttcattgttagaggttcag
gctactctccttaccatgttcagtagcaagacaattttaatagggcacagtctggagtca
gactttaaagcacttaaactaattcacgatacagttattgatacaagtgtattgtttcca
cacaaaatgggccccccatataaaagagcattgcgaaatttgtcatcagaatacctgaaa
aaaataatccaaaattctgttgacggtcacaacagtgccgaggatgcaacagtgtgcatg
gaattaatacattacaaattgaaagaagatctcaagactagatga

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