Manduca sexta (tobacco hornworm): 115451098
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Entry
115451098 CDS
T07401
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115451098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msex03009
]
115451098
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
Pre-60S particles
RNases
115451098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
115451098
NCBI-ProteinID:
XP_030035162
LinkDB
All DBs
Position
6:5858561..5862235
Genome browser
AA seq
1094 aa
AA seq
DB search
MLPSTGYFKGYNCPFYDGGLCERPYCHFRHVKRDSQSVSDGVESGTILQKLVSAEVKKIL
QQTEASGSATAVEIPSVNVDASSASNVVQSNSKVIYNPTPISELNKINNTDSDSNEDVEQ
RKRHIPVPYTPRKPVGMPLRRPVETNGSSKPFIYIPPTVKYTPGSAENVQCDVYSPSGGT
ESNEKYIPGSEIELQEYKPNDTSENVAGRRNYIPSDKNDSKKKVLEYKPIKVPTKTKLPS
VTYQPTPRSLAPCFSSDEDEPDVKKRKLSNDLNGLDDLGPEFDILDQILDEEKQEHDDTS
DSKRKTESSQPQKHDKDKVKETKEEVKQQNKVECKEHKDKDSHKNSKADKKGTSKDHKSR
SHKIDKSTSKDKEKEEKSKSTDRKSSHKSSHKDRDKDKSKHKNKNDREKHSDKSKSKDKH
SDKSKSSKSSDKHSNRTSSKESTSSKSSSKTDHRKSHRNSKDSKDKHKTKTTNTRDLSDN
DNAAPACEIEDESYISESDEEAIALECKKIFEEYVPIEKPKVVEDPHQMEDAQEEEYLPG
KKRIARGADKKIIRNLPLKRENKPSAAQVMAERLAKVKEFHTTKNSSLSTTTGEYSPQKL
DSVKCPFNVPSSGGTKLRIAHVPYASTLVNAKKLIPPNQNKSNCEASTSSMSTNSTVVQT
VKKGVQRVAHIPNEKFIDRPGILEALGSKIPANIRSKYLNMMIDECLKLYVTATDAYSRA
QHEELATSKKCNTVPIYKNSAVLTVSRLRKELLECNGVKKSGSDSSTLARTPGGKAIETG
SWSIENKNRKTIDNHEFSGSKLYNNIQKWILTEEQLQQNGYPRPHQSGEKGRAIIYGQNK
QKPPKGLIRTCCRCKKDYSVDKKGFPALKEECIYHPNNKYRMRGEVRYQCCSQDGSSDGC
CVAPSHVYEFVDYDNLRGYVKTLPPDTFKDDYGVYSLDCEMCYTTHGLDLTRLTVINSAC
KVVYETLIKPMHPIIDYNTRFSGITEEQMAEVKTSLLEVQATLLTMFSSKTILIGHSLES
DFKALKLIHDTVIDTSVLFPHKMGPPYKRALRNLSSEYLKKIIQNSVDGHNSAEDATVCM
ELIHYKLKEDLKTR
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcttccttcaacgggttattttaaaggatataattgccctttttatgacggtggcttg
tgtgaaagaccttattgtcattttcgtcacgtaaaaagagattcacaaagtgttagtgat
ggtgtcgagagtggaactattttacagaaacttgtttcagccgaagttaaaaaaattcta
caacaaacagaagcgtctggatcggctacagctgtagagattcctagtgttaatgtggat
gccagtagcgcctcaaacgtcgttcaaagtaactcaaaggtcatatacaatcctacacca
atatcagaattaaacaaaatcaacaatacagattcagacagcaatgaagatgttgaacaa
agaaagcgtcacataccagtgccttatactccaaggaaaccggttggtatgcctttacga
aggcctgtggaaaccaatggttcatcaaagcctttcatttacatacctccaacagttaaa
tacacgcccggcagtgcagaaaatgtacaatgtgatgtatattccccatcaggtggtact
gagtctaatgaaaaatatatccctggctctgagatagaattgcaagaatacaaaccaaat
gacacaagtgagaatgttgctgggaggagaaattatattccatcagacaagaatgatagc
aagaaaaaagtactagaatataagcctataaaagttccaacaaaaacaaaattgcctagt
gtaacataccaaccaactcctagatctctggcaccatgtttttctagtgatgaagatgaa
cctgatgtcaaaaagaggaagttgtctaatgatctcaatggattagatgacctgggacca
gaatttgatattttggaccaaatattggacgaggaaaaacaagaacatgatgatacaagt
gatagtaaaagaaaaacagagagtagccagccacaaaaacatgataaagacaaggtgaaa
gaaactaaagaagaagtaaaacaacaaaacaaagtagaatgtaaggaacacaaagataag
gactcacataaaaactcaaaggctgacaaaaagggtactagtaaagatcataaaagtaga
tcacataagattgataaatctacctcaaaagataaggaaaaggaagaaaaatcgaaaagt
accgacaggaaatcaagtcataagagttctcataaagatagagataaggataaaagtaag
cataaaaataaaaatgatagagaaaagcattcagataaaagtaaatctaaagacaagcat
tcagataagagtaaatccagtaagagctcagataaacattctaatagaacttcatccaaa
gaatctacaagttccaaaagtagcagtaaaactgatcataggaaaagccatagaaattcc
aaagactccaaagataaacacaaaactaaaacaacaaatacccgagatctgtctgataat
gacaatgcagcacctgcttgtgaaattgaggatgaatcatatatatcagagtcagatgaa
gaagcaatagctttagagtgtaaaaagatttttgaagagtatgtacctattgaaaagcca
aaagtagtagaagacccacatcaaatggaagatgcacaggaagaggaatatttaccaggt
aaaaagagaatagcaaggggggcagataagaaaataattcgtaatctacctttaaaacga
gagaataaaccaagtgcagctcaagtcatggcagaaagattagctaaggttaaggagttt
catacgacaaaaaattcatcactttctactactactggtgaatattcacctcagaagtta
gattcagttaaatgtccatttaatgttccaagttctggtggtactaaactccgtattgct
catgtgccatatgcatctacactggtaaatgcaaaaaaattaattcctccaaatcaaaat
aaatcaaactgtgaagcatcaactagttctatgtctacaaactctacagttgtacaaaca
gtaaaaaaaggtgtacaacgagtagctcacatccctaatgaaaaattcatagatagacca
ggtatattagaagcattgggctcaaagattccggccaatataagatcaaaatatttaaat
atgatgatagatgaatgtttgaaattatatgttactgcaacagatgcttattctagagca
caacatgaagaactggctacaagtaaaaaatgtaacactgtgccaatatataaaaattct
gccgtattaactgttagtagactgagaaaagaattactagaatgtaatggtgttaaaaaa
tctggttcagattcatctacattggcaagaaccccaggtggaaaagctattgaaactggt
tcatggagtatagagaataaaaataggaaaactatagataatcatgagtttagtggctcc
aaattgtacaataacatacaaaagtggatattaactgaggaacagttgcagcaaaatgga
tatcctagacctcaccaaagtggtgaaaaagggagagctataatatatggacaaaacaag
caaaaacctcccaaaggtttaattagaacttgttgtagatgtaaaaaagactattcagtt
gataaaaaaggttttccagctcttaaggaagaatgtatttatcatccaaataacaaatat
agaatgcgtggtgaagtccgatatcagtgctgcagtcaagatgggtcatctgatggttgc
tgtgttgcccctagccatgtttacgagtttgtagattatgataatttgagaggatatgtt
aaaacattacctcctgatacatttaaagatgattatggtgtttattctttagattgtgaa
atgtgttatacaacacatggtttagatttgactaggctcacagtcatcaactctgcttgc
aaagtagtttatgaaacccttataaagcctatgcatccaataattgactacaatacaaga
ttttcaggtataacagaggaacagatggcagaagttaaaacttcattgttagaggttcag
gctactctccttaccatgttcagtagcaagacaattttaatagggcacagtctggagtca
gactttaaagcacttaaactaattcacgatacagttattgatacaagtgtattgtttcca
cacaaaatgggccccccatataaaagagcattgcgaaatttgtcatcagaatacctgaaa
aaaataatccaaaattctgttgacggtcacaacagtgccgaggatgcaacagtgtgcatg
gaattaatacattacaaattgaaagaagatctcaagactagatga
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