KEGG   Manduca sexta (tobacco hornworm): 115451654
Entry
115451654         CDS       T07401                                 
Name
(RefSeq) LOW QUALITY PROTEIN: negative elongation factor A
  KO
K15179  negative elongation factor A
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115451654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msex03021]
    115451654
Transcription machinery [BR:msex03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     115451654
SSDB
Motif
Pfam: NELF-A_N DinI
Other DBs
NCBI-GeneID: 115451654
NCBI-ProteinID: XP_037296000
LinkDB
Position
18:7296470..7305406
AA seq 610 aa
MANVRDSDTSLWLHNKLGTSNDSWTSGSICTQLNAEVLKNIKDCFPDLQTQVKLKLLLSF
FHIPRRNVEEWRNELEEIIEVAAVDSDLWVAMLAEVLKTFPSAGTLNTEIAQFDETRPIF
SDMIGELRRALAKHSELGLLPLECLYLNKNALVSVVGQQPNPVKHFTLKRKPKSVALRSE
LLAKATEAQANQKKAQAPTVPVRSRGMPRKMTDTTPLKGLPSRWAGRSASRAPPPPPAPA
PRPAQRPGIKLLDITEQPATHAQIKKRRKLEMEEGAKKTPAAAPPSPPPADYAKGINNFP
IKTEEQPAASTEPAPAPSAAGASPAPAAAPAPAPTPAPAAPXAPPASEPAQISTEPPPLA
SPILVHQGSAAKPIVIGQQPKLLIAGQAGGKPVLLSAQNLINTSAVILQPGGKAVLLQNI
KPMSQTVVRAAAPVPALHHVPPLQHQLPQTVQMSAPVQTPAPVASAALQSPPAQPQQTPL
LPRRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSEN
IENVLQSDDTYLTMLSEMHFQMNYNNGQWTRLKKYRHIDGMRPQKIPPGSTVISAGNQQP
VVSIANQSVS
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggcgaacgtgcgggatagtgacacatctttgtggctccacaataaactcggtacatcg
aatgattcgtggacaagtggctcaatttgtacgcaattaaatgccgaagttttaaaaaac
atcaaggattgttttccagatctacaaactcaagtgaaattgaaattattgctaagtttc
tttcatatcccgcgcagaaatgttgaggagtggagaaatgagctggaggaaatcattgag
gtggctgcagtggactcagatttgtgggtggccatgctggcagaggttctcaagactttt
ccctctgccggcacccttaatacagagatagcacagtttgatgaaacccgaccaatattc
agtgacatgattggagagctgagaagggctttggccaaacattcagaacttggtctatta
ccgcttgagtgcctatatttgaataagaatgctttagtgtctgtggtgggccaacaacca
aatccagttaaacatttcacattaaaacgcaagccgaagtcagtggcgcttcgcagtgag
ttgctagcgaaggcgacggaggcgcaagccaaccagaagaaggcgcaggcgcccactgtg
cccgtgcgcagtcgcggcatgcctaggaagatgactgataccactccgctgaagggtctg
ccgtcgcgctgggcgggccggtcggcgagccgcgcgccgccgccgccgcccgcgcccgcg
ccgcgccccgcgcagcgccccggcatcaagctgctcgacatcaccgagcagcccgccacg
cacgcgcagatcaagaagaggagaaagctcgaaatggaggagggagcaaagaagaccccg
gcagccgcaccaccgtccccaccgccggctgactacgccaaaggcatcaacaacttcccc
atcaagacagaggaacaaccggccgcgagcacagagccggcgccggcgccgagcgcggcg
ggcgcgtcccccgcccccgccgcggcgcccgcgcccgcgcccacccccgcgcccgccgcg
cccnccgcaccgcccgcctccgagcccgcgcagatcagcaccgaaccgccgccgctcgcc
agccccatactcgtacaccagggctctgctgctaagccaatagtgataggacaacagcca
aaacttctaatagcgggtcaggcgggcggcaaacccgtgctactgtccgcacagaacctc
atcaacacatcggcggttatactgcagcccggcggcaaggctgtgctcttgcagaatatc
aaacctatgtcgcagacggtggtgcgcgcggcggcgccggtgcccgcgctgcaccacgtg
ccgccgctacagcaccagctgccgcagacggtgcagatgtcggccccggtgcagacgccg
gcgccggtggcgagcgcggcgctgcagtcgccgcccgcgcagccgcagcagacgccgctg
ctgccgcgccgaggactctcgctcacgcgagaacaaatgttagaagcacaagatatgttc
agaaacgcgaaccgcgtgacgcggccagagaaggcgcttatactcggcttcatggctgga
tccagagacaatccgtgtccgaatcttggcaacatagtgacaataaaactatcagagaac
atagagaatgttctacaatctgacgacacgtacctcactatgctctccgagatgcacttc
caaatgaactacaacaatgggcaatggacgaggctcaagaagtaccggcacatagacggc
atgcggccgcagaagattccgcccggctcgaccgtcatatccgccggaaatcaacagcca
gtcgtgtccatcgccaaccagagtgttagttaa

DBGET integrated database retrieval system