Manduca sexta (tobacco hornworm): 115451838
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Entry
115451838 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: trithorax group protein osa
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115451838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msex03000
]
115451838
03021 Transcription machinery [BR:
msex03021
]
115451838
03036 Chromosome and associated proteins [BR:
msex03036
]
115451838
Transcription factors [BR:
msex03000
]
Eukaryotic type
Helix-turn-helix
ARID
115451838
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115451838
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115451838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
115451838
NCBI-ProteinID:
XP_037303403
LinkDB
All DBs
Position
6:8178800..8289846
Genome browser
AA seq
1739 aa
AA seq
DB search
MAATQAESQRSEANVEQNPPEQLSESRNALLQNGTDKSVGRVPPDGVVNTKSKSPMSAEP
GQPRDGGEAPGHDRPGDRPLVDQYGPYRYPEGADPYYAPRGGFPGKPRAPPQQPRFFPGQ
AVSQAPGPTPTLNSLLQSSGGPPHRYPNSYEQPPGGYGPAPGPGWPPRPMPPYNPQGSPY
RNSTPRGYGAPPYGGAPGGPQQPPGAYGPPGSYPQRYPPPPGPPGAPSSRPPFSPHQGYE
RGGSPQPPSQPTGAPSPGAPQNAPGALSPTQDTQHPPHMPPHGAQPPPHQGYPPPPRPPQ
TSTPNAHDPDSDLTGQNSNDSGGSGGAGRATTPHLRPTPSPTGSSGSRSMSPAVGTQNVT
MPPRTSSSLSEGSGPAARAVAPGPAGAVPPPGAMVAQPYSHHGAYKAPHYPPPQPPYGYP
PARNHHPYPYGYRPPPPHPPQHYQPLKQGGGRHMGPPGAGGAGGAGGAGEGAMPPPTAPG
DAHDNGPAPPATALVTTGPDGAPLDEGSQQSTLSNASAASGEECGGSGKPRKEFGGSAAP
SPSPGGASHSSLHDDYEASPSPWPRPPSSPVFNSHIPPESYRSKAENQRKRRVGESSSGP
KSDSLSKLYEMDDSPERRGWVERLLTFMDERRTPIAACPTISKQPLDLYRLYLLVRERGG
FVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEA
STKKKGGKSNSTPSASSSNSQESFPGGAAGGGGAPMDGYPPQYAGYPPQPNHAQGGAVGG
VGGVGGVGGVGGAGAAGDNLAASNPFDEPPGPRRAPGYQQGYGYEYGSPYQPNRPVYPPY
GPDGDRGYRAGPGGEYQYGAYGGAFRGAAPAGAGTPPPAQPYPEYYRAPHPHHAPHPAHP
PHPAHAPHPPHPPVSPHQQHPPHQPHQQHQPHQPHQPHQPHQPPHEMSGGAQAQSVGNLM
SSQLARQLVAPLPPNPRPYYGGGKASGPGGPGGPGAAGAPGAGSPRRHPDFAKGDGAYAA
GRAAPGGAAGARFGGAWGGAFPRSAPPPAAPWRAPATHPPNWPHQPYPPQTSGAPAWGGA
PRPPTQDGYPSSTAPSTSVAGGGAQIKRELTFPAECVEAAVPSGEKRRRLTRADVAPVDA
WRIMMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHRSLSDVFD
APTEEDEPWYGAPRAPTPPPGPKRRAPPPDPADRVRVISGEDYTLQSRRRHPVVLRHDDE
LFAPEDEEDEQPDGVEDVLEPWQLASDPAGAAHLVPCFRGEHLHLPFVRVLPGTRAPSPP
AASPAPAPPEPPEPSPPTPAPAPESSPPADRDNLDAEPMELEPERRPNLLVRDPAGVLKR
RKLDDYEDECYERDEPSLNLVSETRDALARRCIALSNILRGLTFVPGNEVEFSRSGAFLA
LAGKLLLLHHEHAPRAARARAYERAARDEVDAGACCSSLRGGAEWWWDALAQLREDALVC
CANIAGGVELAGQPEAVARPLLDGLLHWSVCPAAVAGDAPPTAGAASPLSPRRLALEALC
KLCVTDANVDLVLATPPRGRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGEEAAR
EVARHAPAVAQLVAFIERAEQTALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLA
RHTENRPLIRRHERRLLSLVMSQILDQKVAHELADVLYYCAAARGTGEPEEPRESERDQ
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcaggcagagtcccagcgtagcgaagcgaacgttgagcagaatccaccg
gaacagctcagtgaatctcggaacgctctgttacaaaacggcaccgacaagtccgtcggg
cgcgttccgcccgatggcgtcgtgaacacaaagagcaaatcgcctatgtcggccgaaccg
ggccagccacgcgacggcggcgaggcgcccggccacgaccgacccggggatcggccgctg
gtggaccagtacggcccgtataggtatccggaaggcgccgatccgtattacgcgccgcga
ggcggttttcccggcaaaccgcgagcaccgccgcagcagccacgcttcttcccgggtcag
gcggtgtcgcaggcgccggggcccacgccgacgttgaactcgttgctgcagtcgagcggg
ggcccgccgcaccgctatccgaacagctatgagcagccgccagggggttatgggcccgcg
cctggccccggctggccaccgcgtcccatgccgccctataatcctcaaggaagcccttat
agaaattctacgccgcgtgggtacggcgcgcccccttacggcggcgctccggggggaccg
cagcaacccccgggagcgtatggccctccaggatcctaccctcagcggtatccaccgcca
ccggggccgcctggcgcgcccagctcgagaccgcccttctcgccacaccagggctatgag
cgcggcggttccccgcagccgccgtcgcagccgacgggcgcgcccagcccgggcgctcct
cagaacgcgcctggcgccctgtcgcccacccaggacacgcaacacccgccgcacatgccg
cctcacggggcccaaccaccgccgcaccagggttaccctccgccgccgaggcctccgcag
acgtccacgccgaacgcacacgatccagactctgatctgaccggtcaaaacagcaatgac
tcgggcgggagcgggggcgcggggcgcgctaccacgccgcacctgaggccgacgcccagt
cccaccggctcaagcggctctcgctccatgtcaccagctgtcggcacgcagaacgtaacg
atgccgccgcgaacgtcgtcgtcgctgtcggagggcagcgggccggcggcgcgggctgtg
gcccccgggccggcgggcgcggtgccgccgcccggcgcgatggtggcgcagccctattcg
caccacggcgcgtacaaggcgccgcactacccgccgccgcagccgccctacgggtacccg
cccgccaggaaccaccatccgtacccctatgggtatcgtccgccaccaccacatccgccg
caacactatcaacccctcaagcagggcggcgggcggcacatgggtccgccgggcgcgggg
ggcgcggggggcgcgggcggcgcgggcgagggcgccatgccgccgccgaccgcgccgggc
gacgcgcacgacaacgggcccgcgccgcccgccaccgcgctcgtcaccaccgggcccgac
ggcgcgccgctcgacgagggcagccagcagagcacgctcagcaacgcctcagcagcgtca
ggcgaggaatgcggcgggtctggcaagccgcgcaaggagttcggcggcagcgcggcgccg
tcgccctcgccagggggcgcgtctcactcctcgctgcacgacgactacgaagcctcgccc
agcccctggcccaggccgccatctagtcccgtatttaacagtcacataccgccggagtcc
tacagatcaaaggctgagaaccaaaggaaacgtcgcgtaggagagtcttcgtcaggcccg
aagtcggactcgctgagcaagctgtacgagatggacgactcgccggagcggcgcgggtgg
gtggagcggctgctcacgttcatggacgagcggcgcacgcccatcgccgcgtgccccacc
atctccaagcagccgctggacctctaccggctgtacctgctggtgcgcgagcgcggcggg
tttgttgaggtgacaaagaacaaaacgtggaaagacatcgccggccttctcggcattggc
gcgtcgtcgtccgccgcgtacacgctacgcaaacactacacgaagaacttgctcgcgtac
gagtgccacttcgatcgcggcggcatcgacccgcagccgatcatcaaccaggtggaggcg
tccaccaagaagaagggcggcaagtctaacagcacacctagtgcgagctcgtcgaactcg
caggagtcgttcccgggcggcgcggcgggcggcggcggcgcgcccatggacggctacccg
ccgcagtacgccggctacccgccacaacccaaccacgcgcaaggcggcgcggtgggtggc
gtgggcggtgtgggcggcgtgggcggtgtgggcggcgcgggcgcggcgggcgacaacctc
gccgcctccaaccccttcgacgagccgcccggcccgcgccgtgcgccagggtaccaacaa
ggttacgggtatgaatatggatctccttaccagccgaacaggcctgtctatccaccttac
ggaccggatggggacagggggtaccgcgcgggtccgggcggcgagtaccagtacggcgcg
tacggcggcgcgttccgcggcgcggcgccggcgggcgcgggcacgccgccgcccgcgcag
ccctaccccgagtactaccgcgcgccgcacccgcaccacgcgccgcaccccgcgcacccg
ccgcaccccgcgcacgcgccgcacccgccgcacccgcccgtgtcgccgcaccagcagcac
ccgccgcaccagccgcaccagcagcaccagccccaccagccgcaccagccgcaccagccg
caccagccgccgcacgagatgtctggcggcgcgcaggcgcagagtgtcggtaacctaatg
agctcgcagctcgctcggcagctggtcgcgccgctgccgccgaaccccagaccctactac
ggcggcggcaaggcgagcgggccgggcgggccgggcgggccgggcgccgcgggcgcgccg
ggcgccggcagtccgcgccgacatcccgacttcgccaagggcgacggcgcctacgcagcg
ggccgggcggcgccgggcggcgcggcgggcgcgcggttcggcggcgcgtggggcggcgct
ttcccccgctccgcgccgccgcccgccgcgccctggcgcgcgcccgccacgcacccgccc
aactggccgcaccaaccatacccgccacagacaagcggcgcgccggcgtggggtggagcg
ccgcgacccccgacacaagacgggtacccctcctcgactgcaccctccactagtgtagcg
ggcggcggagcgcagataaaacgagaattgacgttccccgccgagtgtgtagaagcggcc
gtgcccagcggggagaaacggcgtcggcttacacgcgctgacgtcgcgcccgtagacgcg
tggcgcatcatgatggcgctcaagtccggcctgctcgccgagacctgctgggcgttagac
atactcaatattttgctgttcgacgataactgcatcggatattttggactgcagcacatg
cccggcctattagatttgttactggaacacttccatcgcagtctcagcgatgtgttcgat
gcacccacagaagaagacgagccgtggtacggcgcgccgcgtgcgcccaccccgccgccc
gggcccaagcgccgcgccccgccgcctgacccggccgaccgcgtgcgcgtgatctccggc
gaggactacacgctgcagtcgcgccgccgacacccggtagtgctgaggcacgacgatgaa
ctgttcgcgccagaagacgaagaagatgaacagcccgatggcgtggaagacgtactggag
ccgtggcagctagcgtccgaccctgcaggtgcggcgcatctcgtgccctgcttccgcggc
gaacatctacacctgccgttcgtgcgagtactgccgggcacgcgtgcaccttcaccgccc
gccgcttctcccgcaccagcaccacctgaaccaccggagccttcgcccccgacacccgct
cccgctccggagtcttcgccgcctgcggaccgcgataacctcgacgcagaaccgatggag
ctcgagcccgaacgtcgccctaacttgctggtgcgtgatccggccggcgtgctcaaacgg
cgcaaactcgatgactatgaggacgagtgttacgagcgggacgagccgagtctcaacctt
gtcagtgagacgcgagatgcactcgcgcgtcgctgtatcgcgctgtctaacatccttcgc
ggtctcacgttcgtgcccggtaacgaggtggaattttcccggtcgggcgcattcctagcg
ctggctggcaagttgctgctgctgcaccacgagcacgcgccgcgggcggcgcgcgcgcgg
gcctacgagcgagcggcgcgcgacgaggtggacgccggcgcctgctgctcctcgctgcgc
ggcggcgccgagtggtggtgggacgcgctcgcgcagctgcgtgaggacgcgcttgtatgc
tgcgccaacattgccggcggcgtcgagttggccggacagccggaagccgtcgcgcgaccg
ttgctcgatggtctgctgcattggagcgtgtgtccggcggcggtggccggggacgctcca
ccgacagccggcgctgcctcaccactgtcgcctcggcggctggcactggaggcgctatgc
aagctgtgcgtgacggacgccaacgtagacctggtgctggcgacgccgccgcgcggccgc
atcgcggcgttgtgcgcaggactggcgcgcgacctgtgccgacccgagcgacccgtggtg
cgggagttcgcggtgaacctgctgcattacctggcgggcgcaggcgaggaggcggcgcga
gaggtggcccgccacgcgccggcggtggcgcagctggtggcgttcatcgagcgcgccgag
cagacggcgttgggcgtcgccaaccaacacggcgtggcggcgctgcgcgacaaccccgac
gcgatgggcacgtcgctggacatgttgcggcgcgcggccgccacgctgctgcggctggca
cgacacacggagaaccggccgctgatccgtcggcacgagcggcggctactgtcgctggtg
atgtcgcagatcctggaccagaaggtggcgcacgagctggcggacgtgctgtactactgc
gcggcggcgcggggcacgggcgagccggaggagccgcgcgagtcggagcgcgaccagtga
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integrated database retrieval system
