Manduca sexta (tobacco hornworm): 115451879
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Entry
115451879 CDS
T07401
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msex04121
]
115451879
Enzymes [BR:
msex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115451879
Ubiquitin system [BR:
msex04121
]
Ubiquitin ligases (E3)
U-box type E3
115451879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-CCHC
zf-C3HC4_3
zf-RING_5
U-box
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
115451879
NCBI-ProteinID:
XP_037293656
LinkDB
All DBs
Position
12:7890125..7919453
Genome browser
AA seq
1599 aa
AA seq
DB search
MSVHYKFKSALDYDTVTFDGLHISVGDLKAAISQQKRIGKTSDFDLQITNAQTKEVYIDD
NTLIPKNTSLLVARVPLAQQPKKQWENSNNNLSSLHKDVAPNKGLADLSRMEGSEQDKIN
AMISQSTFDYDPSNYQKIRGQNQRGAVPANYICYKCQKRGHWIKDCPAANSGDPVEIRRS
TGIPRSFMVPVEGPKAPGAMMTPSGTFAVPAVDHEAYMASENSGGGDAPPSNAPIASEPN
IPDELICSLCRDLLTDAVMIPCCGNSFCDECIRGALLESEDHECPDCREKEISPTTLIPN
RFLRNSVLSFRNQTGYSRRTPHRPAAAPPQSRPPPMDVPPPAVSQPPLNGPVQPAAPSST
GPPQSHKPDLEPPSNIPMNMPRIDEQRASTPTIDERRDPMSSQVMYNRGAPPYVPGLPPP
PSHYNEPPYSRSLRPGPFNDRYPPDPYQPPPPGIKDSPSNGATEDPLEAFNRMIREKEMR
AKRREERRRAHSGSRSRSRTPRSVRSARSGRSPRGPRSPRSPRSPRSPRSPRSPRSPRSP
RSPRSPRARPRSRASSRLRYSRSRSMSRGRIRRSPWSPRRRRSRDRSLSLSRSPSPRRRV
MRYRSPGPRSPLRSPLRSPLRSPPRSPVRSPLRSPRRSVLRSPPPRPLSPHRYAGVYDEL
LSPPRRSVEPPYGARYGPRSSVPPPVYPPLGVKPPASMGNVPMHPDPPPGYRGRYDAAPF
EEIPPGLEPPVPGFEPSPFEKPSFGPPGPIERERIPPPNFRDPYRPPTYEGPPGYRDMSM
PPVSSEIPVHVGEQPPRYRDNFRPGPTYRDQSSVPFRDGQPYRDSGSQGAYRDPNFRPPQ
FRDSNYRNAPPYREGSFRDNVSHTNFREGGVPYRPPSADPREPIPLNYHDANYRENFRED
NNAPREYNRSAGYRPNVRSRVGPRRNPNAEGDRHREREGRDRDRYNENRDNPDRPDRNRD
VDRRPVYDKARDTREDRPREFERGREYEKEREHGTPDKKTRLSPKRSRETRDKKRSESRG
RSRDRERDNRRDKKDDRVHEKSSNDRSRDHKEKEKKLKERKKKKREKEKDTEKKKKRDKK
EKKDKETVKKEDLGVTKDDTKEMEKQEKPPEVDKTVKTEKSDIDIEKVKCETSSKAEGNI
KSKDDLYGDEAADAVDNEIIQNYVKTENNVVNNEVKNLEAANKDEPFDGIELQANADELD
LKVEMETNSQPNSNMLAPMPELSKWEVDEENVEKAKEPGEITSPEEEEDGTKVTSDVIKR
AENAIFAKAIHSLRPIEIKKISSDRLKLYGDDQPKVPMNNIQITVPVADAEQRSIEINDK
KKRHSKTPPPRLSVKERLGGKIDDVRRGREPRVVHSTVERVKSRSKTPKKEQPYRRVTVE
KERNKKDTAGRSDSSKSERRVFSEGIKSDKQRGGSPRGFKKCFDKNPRDDKRNNSRDRDQ
EKNTTDNKAMPTDRERKKSILDEAHFEPDYDENVESDGETKEDIGKKRERSGSLSGRDHV
DVKKLKIDNDSIKLDLTNVKKKPETESETSTDSDFSSSSSSSDARKRKKKKKRAKKKKKR
AASDSDSESESSTDEHKKKKKKRKHKKKASKKKKKSKHK
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcattataaatttaagagtgcattggattatgacacggtcacattcgatggg
cttcacatatctgtaggcgatttgaaagctgctatatcgcaacaaaaacgtataggaaaa
acttccgattttgatttgcagatcaccaacgcccagactaaagaagtttacattgatgac
aacactctaatccctaagaacacatcactgttagtggcaagagtgccccttgcacaacaa
ccaaaaaaacagtgggagaattctaacaataacttatcatcactccataaagatgtggca
cctaacaagggattggcagatctatctcgcatggaaggtagcgaacaggataaaataaat
gctatgatatcacaatccacctttgactacgatcctagcaattatcagaaaattagagga
cagaatcagagaggtgctgtaccagctaattacatttgttacaagtgtcaaaagcgtggg
cattggatcaaagattgtcctgcggcaaattcaggtgacccggtggaaataaggcgtagt
acaggcattccccggagttttatggttcctgttgaaggccccaaggcacctggcgccatg
atgaccccaagcggaacctttgctgttcctgcagttgatcatgaggcttacatggcgtca
gaaaattcaggcggtggcgatgctccaccgtcgaacgcgcccattgcgagcgagccgaac
atacctgatgaactcatctgcagcctgtgtcgagaccttctcaccgatgctgtcatgata
ccgtgctgcggaaattccttctgtgatgaatgtatccgaggcgctttgctggagtctgag
gaccacgagtgtccagattgtcgcgaaaaagaaatatctccgacaacattgatacccaac
cggttcctgagaaactcggttttatcattccgcaaccagacggggtacagtcggcgcaca
ccgcaccgacccgctgccgccccgccgcagtctcgtcccccacctatggatgtaccacct
ccagctgtgtcgcaacccccgctgaatgggcccgtgcagcctgcggctccgagtagcaca
gggccgcctcagtctcataagcctgatctagaacctccctccaatataccaatgaatatg
cctaggattgatgagcaaagagcgagcacacctactattgatgagaggagggatccaatg
tcttcgcaggtgatgtataatcgtggagctccgccgtacgttccgggcctgccgccgccg
ccctcacattataatgagcctccatattcaagatctttacggccggggccgttcaacgac
cgctacccgcccgacccgtaccaaccaccgccgcctggcatcaaagattcgccgtctaac
ggggccaccgaggacccgctggaggcgttcaaccgcatgatccgcgagaaggagatgcga
gcgaagcgtcgcgaggagcggcggcgcgcgcactccgggtcccgttcgcggtcgcgcacg
ccgcgttcggtgcgctcggcgcgctcgggccgctcgccgcgcggtccgcgctccccgcgc
tccccgcgctccccgcgctccccgcgctctccgcgctcgccgcgctcgccgcgctcgccg
cgctcgcctcgctcgccgcgtgcgcgccccaggagtcgcgcctccagtcgactccggtat
tctagatctcgctctatgtcgcggggccgcattcgtcgctcgccctggtcgccgcgcagg
cgtcgctcccgagacaggtcattatcgctttctcgttccccgtcgccacggcggcgtgtg
atgcggtaccgatcaccgggcccgcgttcgccgctgcgctccccgttacgttcgccgcta
cgttcgccgccgcgttcgccagtgcgttcgccgttgcgttctccgcgacggtcggttttg
cgttcaccgccgcctagaccgctttccccgcatcgatacgccggagtttatgatgaactg
ttgtcgccaccgagacgtagtgttgagccgccgtatggagccagatatggtcctagaagc
agtgttcctccacctgtttacccgccattgggagtaaaacctcctgcgagtatgggaaat
gtccccatgcaccctgatccgccaccgggttatcgaggccgctatgacgcagctccattt
gaagaaattccaccaggtttagaaccacctgtgccaggatttgaaccatctccatttgag
aaaccatcattcggcccaccaggcccaattgaacgtgaaagaattccgcctcctaatttt
agggacccctacagaccacccacatacgaagggccacctgggtacagggacatgtcaatg
cctcctgtgtctagtgagataccagtacatgtcggagaacaaccgccacgttatcgcgat
aattttagacccgggcctacttatcgtgatcaaagttcagttccattccgggatggacaa
ccgtatagagattctgggtcccaaggagcttaccgtgatcccaatttccgacctcctcaa
tttcgggatagcaattacagaaatgctcctccatacagggaaggtagctttagagataat
gtgtcgcatactaatttccgtgaaggaggagttccttatagaccacctagtgccgatcct
cgggaaccaatacctctcaattaccacgatgccaattaccgtgagaactttagagaagat
aacaatgctccccgggaatacaacagatcagcaggatacagacctaatgtccgcagtaga
gtcgggccaagacgtaatcctaatgctgaaggtgacagacacagggaaagggagggccgc
gatagagatcgttacaatgaaaaccgtgacaaccctgacaggccggatagaaatcgggat
gtagataggagacctgtgtatgataaagctcgtgatacacgggaagaccggcctcgtgaa
tttgaaaggggtcgagaatatgaaaaagaacgggaacatggcacaccagacaagaaaact
cgtttatcgcctaaacgaagtagagaaacgcgtgataaaaaacgtagtgaatcaagagga
cgttcgagagatcgtgaacgtgacaatagaagagataaaaaggatgatagagttcatgaa
aaatcctctaatgacagaagtagagaccacaaggaaaaagaaaagaaacttaaggaaaga
aaaaagaaaaagagggaaaaggaaaaagacacagaaaagaagaaaaaacgagataaaaag
gaaaaaaaagacaaggaaactgtcaaaaaagaagatttaggagtaaccaaagacgacacc
aaggagatggaaaaacaggagaagccacctgaagtcgataaaacagtaaaaactgaaaaa
agtgatattgatattgaaaaagttaagtgtgagacgtcgtctaaggcggagggtaatata
aagtctaaagatgatttatatggcgatgaggctgccgacgctgttgataatgaaataata
caaaattatgtcaaaactgaaaataatgttgttaataatgaagtaaaaaacctcgaagct
gctaataaggatgaaccgtttgatggaatagaacttcaagctaacgcagatgaactagat
ttgaaagttgagatggaaaccaatagtcagccaaatagtaatatgttagcacctatgcct
gaattatctaaatgggaagtagacgaagaaaatgtagaaaaagcaaaggaacccggagaa
ataacttcacctgaagaggaagaagatggaactaaggttacatcggatgttataaagcgt
gccgaaaatgctatatttgctaaggccatacattctctaagacctatagaaatcaagaag
attagtagtgatcgtctaaaattatatggtgatgatcaacctaaagtacctatgaacaat
attcaaataacagtcccagtagccgatgcggaacagagatcaatagaaattaatgataaa
aagaaaagacattcaaaaactcctcccccgagactgtctgtcaaagaacgcctcggtgga
aaaattgacgatgttcgtagagggcgcgaaccgcgagttgtgcatagtacggtagaacgc
gtaaaatcacggtctaaaactccaaagaaagagcagccgtaccgaagagtaacagtggag
aaggaaagaaataaaaaagacacagctgggagatcagattcatcaaaaagtgaaagacgt
gttttttctgaaggcataaaaagcgacaaacagcgcggtggaagcccacgtggttttaaa
aaatgttttgacaaaaatcctagagatgacaaaaggaataattcacgtgatcgtgatcag
gaaaagaatacgacggacaacaaagctatgcctactgatcgtgaaagaaagaaatcaatt
ttagatgaagcgcattttgaaccagattatgatgaaaatgtagaatctgatggtgagacc
aaagaagatattgggaaaaagcgcgaacgttctggatcgcttagtggtcgcgatcacgtt
gatgtcaagaaacttaaaattgataatgattctattaaattagatcttacgaacgttaaa
aagaaacctgaaactgaaagtgaaacatcaaccgactcggacttttcgtcttcatcatcg
tcatcggacgctcgtaagcgcaagaagaaaaagaaacgcgcaaagaaaaagaagaaacgt
gctgcaagtgatagcgacagtgagtctgaatctagtacagacgagcacaagaaaaagaag
aagaagcgcaagcacaagaagaaagctagtaagaaaaagaagaagtcaaaacacaagtaa
DBGET
integrated database retrieval system
