Manduca sexta (tobacco hornworm): 115451945
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Entry
115451945 CDS
T07401
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115451945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115451945
Spliceosome [BR:
msex03041
]
Complex A
U1 snRNP components
U1 related factors
115451945
Complex B
115451945
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
DUF4853
Motif
Other DBs
NCBI-GeneID:
115451945
NCBI-ProteinID:
XP_030036228
LinkDB
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Position
24:complement(8944257..8964362)
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AA seq
827 aa
AA seq
DB search
MEPPNTRTSSPGIIGSTPLLPPPMLGGIPAPMPPAVAMPPVPGMPPNMAGLPSPMAFPSM
IPPFSMPPPGFPSFKPELTAPAPDIAPLANQSSPWSEHRAPDGRTYYYNSVTKQSLWEKP
DDLKTPAEKLLSACVWKEYTTDAGRLYYHNIETKESSWVIPKELQEIKDKIAAEEATQAA
LSAELPPGEVPLPSSPAAPAHASALDEAMAKTLAAIDPSLTTSIPIPEDIKPEEITAPPM
NNLSDNAEQPPELQYKDKKEAIEAFKELLRDRNVPSNATWEQCVKIISKDPRYATFKKLN
EKKQAFNAYKTQKLKDEREEQRLKTKKNRENLEEFLLSCDRVTSLTKYYKCEEMFNNLEI
WRCVPESDRRDIFEDCIFTITKREKEEAKTLKKRNMKMLAQVLENMSEITYSSTWSEAQV
LLLENSAFKNDVSLLGMDKEDALIVFEQHIRNLEAEYQQEREQVKKRNKRQQRKNRDNFL
ALLDSLHEEGKLTSMSLWVELYPVISADMRFSAMLGQSGSTPLDLFKFYVENLKARFHDE
KKIIKEILKEKNFEVKCDTTFEEFATVVCEDSKSASLDAGNVKLTYNSLLEKAEAKKKER
QKEESKAQKKIESAFKWALSEANIDHLLSWTEVKEKIDLNAPEFMAVPHEEDRIKIYKDF
QHEQEESCLHYHHTKSRKAKRSKKKKRSHSASLSRSRSPSPPPAAMRSPSPAPSHASWTS
DEGRKHKKSKKKHRKHSPIPKSPTPEEGGISDPDEPLRHKSKKWKRSAPSSPDDDHHEHH
DHSHKPKKKKDKKDKKERFGGSAAWSDAELESRRAALLAQLHEHEAD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagccgccaaatacaagaactagctccccaggaatcataggttcaacgcctcttctt
cctcctccaatgctgggcggaatacccgcaccaatgcctcccgcagtagcaatgccacct
gtgcctgggatgcccccaaacatggctggactgccatcaccaatggcatttccttcaatg
atacctccattttctatgccaccaccaggatttccttcttttaaaccagaattaactgct
cctgccccagacatagccccattggcgaaccaaagcagtccatggtcagagcacagagct
cccgatggtcgcacatattattataattctgttacaaaacagagtctttgggaaaaacca
gatgatttaaaaactcctgcagagaaattgttatctgcatgtgtttggaaagaatacaca
accgatgccggccggctgtattatcacaatattgagacaaaagaatccagctgggtaatc
ccaaaggaactgcaagaaattaaagacaaaattgcagctgaggaagctacacaggccgcg
ctgagcgcagagctgccgccgggcgaggtgccgctgccgtcctccccagctgcgcccgcg
catgcttccgcgctcgacgaagccatggccaagactctcgcggccatcgatccctcgctc
acaacttcaatacccattcctgaagatataaaacctgaagaaataaccgcaccacctatg
aacaatctttcggataatgcagaacaaccaccagaattgcaatacaaagacaaaaaggaa
gcaattgaagcctttaaagaacttttaagagacaggaatgtaccatccaatgctacatgg
gaacaatgtgtgaaaataatatcgaaagatccacgttacgctacattcaagaaactcaat
gaaaagaaacaagctttcaatgcctacaagacgcaaaaactcaaggacgaaagagaggag
caaaggttgaagactaaaaagaaccgtgaaaacttagaggagtttttattaagctgtgat
cgtgtcacatcgctcaccaagtactacaaatgtgaagaaatgttcaataatttagagata
tggcgatgtgttcccgaatcagatcgcagagatatatttgaggactgcattttcacaata
actaaacgtgaaaaagaagaagctaagactttaaagaaacgtaatatgaaaatgctagct
caagttttggaaaacatgagtgaaattacatacagtagcacatggagtgaggcacaggtg
ttgctgctcgaaaactctgcatttaagaacgatgtcagcttactaggcatggacaaggag
gatgcccttattgtatttgagcaacacattagaaatttggaggcagaatatcaacaagaa
agagaacaagtaaaaaaaagaaacaaaagacaacaaaggaagaacagagacaatttcttg
gctttgttagacagtctacatgaagaaggaaaactcacctctatgtcactgtgggttgag
ctgtatccggttatttccgcagacatgcggttttcagccatgttaggacagagtggttcc
acgccactggacctatttaagttttacgtcgagaatttgaaagctcgattccatgacgag
aaaaaaattatcaaggagatattgaaggagaagaactttgaagtgaaatgtgacactacg
tttgaggagtttgcaacagttgtgtgcgaagacagtaagtccgcctcgttggacgcgggc
aacgtcaagctcacgtacaactcgctgttggagaaggcggaggcaaagaagaaggaaaga
cagaaagaagaatctaaagcacagaaaaaaatcgaaagtgcatttaaatgggcgttgagt
gaagccaacattgatcatttactgtcttggaccgaggtcaaagaaaaaatagatttaaac
gcaccagagtttatggccgtgccgcacgaagaagaccgtatcaaaatttataaagatttc
caacatgaacaagaagaaagttgtctgcattatcaccacacgaagtcacgcaaggcaaaa
cggtcgaaaaagaagaaacgttcacattccgcttcgttgtcgcggtctcggtcgccgtcg
ccgccgccggccgcgatgcgctcgccctcgccggcgccgagccacgcctcgtggacctcc
gatgaaggccgtaagcacaagaagtccaagaagaaacatcgcaaacattcgcctataccg
aaatcgccgacaccggaggaaggcggtatatctgatccagatgagccgttgcggcacaag
agtaagaaatggaagcgcagcgcgccgagcagccccgacgacgaccaccacgaacaccac
gatcactcgcacaagcccaaaaagaagaaggacaagaaagacaaaaaagaaaggttcggc
ggctcggcggcctggagcgacgcggagctggagtcgcggcgcgcggcgctgctggcgcag
ctgcacgagcacgaggccgactga
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