Manduca sexta (tobacco hornworm): 115452068
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Entry
115452068 CDS
T07401
Name
(RefSeq) RNA polymerase-associated protein Rtf1 isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115452068
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
115452068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
DUF7667
Motif
Other DBs
NCBI-GeneID:
115452068
NCBI-ProteinID:
XP_037293746
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Position
2:319240..338166
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AA seq
799 aa
AA seq
DB search
MAKRKNKPLIDSDSSSECSDLDSQFLNLAKKKKKTDSPPQSRSKGKSSGKSSDSESDWDD
DDKKNSKSSSSSDSDSESDAKSEASTKKEQPRSTRKTSSDMSDDNKKRPEPKKVEVRKST
DSGGSEKKKDTFSEPEEGEVSSHSSDNDSIDSEEEFDDGYDENLMGDEEDRARLAAMSEK
EREQEIFKRIERRDLMKTRWEIERKLRLARRSAAERSASPGAIARRREARKRRKALRDQR
QQREKEREREREREREKQAEAEAEQPKEPEEEKDAPPASPGEILDDSKDAEASERSASPL
FGAKTEGRKRNVDDRRQNAMAALRAQRDAKATRVEHIKQKRKLEEEKNKDKEEEDDADAE
IIGGTSKQSVKLKASDIYSDDSGSDSEDNKSDISQSSVKMRTTLASGRRSSTSSSSSGGE
EEEKKREEVEVKYADTRDQINKLRLSRFKLERLVHLPFFARVVNGCFVRIGIGNNNGNPV
YRVAEIIDVYETAKIYNLGNTRTNKGLKLRHGTQDRVFRLEFVSNQEFTDGEFQKWHKAI
KDANKKPPTMDFVRNKISEVKDALMYEFKEEDIEKIVAEKERFRSHPTNYAMKKTQLMKE
RDVAQIRGDDELVMELNAKLEELEERASLLDKTRTSSIQSISYINNRNRKLNVEAAEKAI
MEEVKANKGKKQDDPFTRRHTKPVMNFKSHQGNRSQEFEAAVADAQKQREEEHKMARERQ
ERERLVQAEEDERSRVDNPSSTDNTSLYSLHDFDINIELDLPVAKAVSSQPKQVTTKVKE
TGPKRSLNLEEYKKRHGLI
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaagaataaaccattaatagattcagattccagcagcgagtgttcagat
ttagactcgcaattcttaaacttagcaaagaaaaaaaagaaaacagattcccctccacag
tcaagatcaaagggtaaatcatcgggaaaatcatcagatagtgaatcagattgggacgat
gatgataagaagaactccaaatcttcgtcatcatcagactcggactcggaaagcgatgca
aaaagcgaagcgtcaacaaaaaaagaacaaccacgcagcactcgaaagacatcttcagat
atgtccgatgataataaaaagcgacccgagccaaaaaaggttgaggtcagaaaaagcaca
gacagtggagggtctgaaaagaaaaaggacacttttagtgaacctgaagaaggtgaagtg
tcatcacattcatcggataatgattccattgattctgaagaggaatttgatgatggatac
gatgagaacctcatgggggatgaggaagatagagcccggctggcagctatgtcggagaag
gagagagaacaggagatattcaagagaattgagaggagggaccttatgaaaacaagatgg
gagatagaacgcaagcttcgtttagctcgtcgttccgccgcggagaggtccgcgtccccc
ggcgccatcgcgcggcggagggaggcgcggaagcggaggaaagcgctgcgagaccagaga
caacagcgcgagaaggagagggagcgcgagcgggagagagagagggagaaacaagcagag
gccgaggcagaacaacccaaagagcctgaggaagagaaggatgctccaccggcgagtcct
ggggagatactggatgattccaaagatgcagaagcatcagaacggtcagcatcaccactc
ttcggtgcaaaaacagaaggtcgcaaacggaacgtggacgatcgcagacagaacgcgatg
gccgcgttgagggcacagagagatgccaaggcgacaagagtggaacacatcaagcagaag
agaaaattagaggaagagaagaataaggacaaggaagaggaagatgacgctgacgcggaa
ataataggcggcacgagcaaacagagcgtcaagttgaaggcgtcagatatttattctgac
gattcgggatcagattctgaagataataaatctgatatctctcagagttctgtaaaaatg
agaacgactttggcttcaggacgtcgaagttcaacaagctcttcgtcttctggaggagaa
gaggaagagaagaaacgcgaagaagtagaagtcaaatacgcggacacgagggatcagatc
aacaaactcagactgagcaggtttaagctggagcgtctggtccacctgccgttcttcgcg
cgagtcgtcaacggatgcttcgtgcgcatcggaattgggaacaacaacggcaaccccgtg
tacagggtggcggaaattatagatgtatatgaaacggcaaagatatacaatttgggcaac
acgcgaaccaacaagggattgaagttacgtcacgggacgcaggacagagtgttccgactg
gagtttgttagcaatcaggaattcactgatggcgagttccagaaatggcacaaggcgata
aaggacgcgaacaagaaaccccccaccatggactttgtgcggaacaagatcagcgaagtt
aaagacgctctgatgtatgagttcaaggaagaagatatagaaaaaatagtggcagagaaa
gagcgtttcagatctcatcctacaaactacgcgatgaagaaaacacaactcatgaaggag
agagacgtggcgcaaatcagaggtgacgatgaactggtgatggaactcaacgccaaactg
gaagagttggaggagagagccagcctgctggacaagacgaggacctcctctatacagagc
atatcgtatatcaacaacaggaatagaaagttgaatgtagaagctgccgagaaggccatt
atggaagaggtgaaagcgaacaaaggcaagaagcaagacgacccgttcacgcggcggcac
accaagcccgtgatgaacttcaagtcgcaccaggggaacaggagtcaggagttcgaagcg
gccgtcgcagatgctcagaaacagagagaagaagagcacaaaatggcgcgcgagagacaa
gaacgggagagactcgtgcaagcggaggaggacgagagatcgcgagtggacaacccgtcg
tctacggacaacacgagtctgtactctctgcacgacttcgacatcaacatagagctagac
ctgcctgtggcgaaggccgtttcctcccaaccgaagcaagtgaccacaaaagtgaaagag
accggaccaaagcgctcgctgaacctcgaagagtacaagaaacgccacgggcttatatga
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