Manduca sexta (tobacco hornworm): 115452638
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Entry
115452638 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115452638
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
115452638
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
115452638
NCBI-ProteinID:
XP_037301893
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
GEQGSWEXGLSYECRSLLFKALHNLIERCLLSRDFVRLGKWFVQPYDGDEEDVGKSPWHL
SFSFAFFLHGESTVCASVDVRQHPPVRTLTAKRLAKINSPDHNGDAKVILAPFGLEGRLT
GREWGEADAATARLLDAWRHLYPLEQGCGAVEVVCGGSRMHYPSPYALVTDMEPGARAPP
PRMAPRALTALTTPAPHQSAELCFSDPAADKNDDFVDPTRKTPCTCTKFLRRDRCRLLSH
FDISYLGSPAGLALCGCRWRRRRAPRPFHRRAAPARLRHHAPPPPPAPTRGSLVAGALAG
GGGAGSPGSCAGSPAPGASAPPSAGPPPPSPGHHAAQGQHQTTGAVPTTLHTPAPTPDPH
APPTPAPPSLPPPKLYNQGESPGWSGWSGWGGEPPEAARRPVLPRAPRRPDPLEDETALR
MLYDYTTVYAWLEHPVKRFKSEENCFREELALGVAAGEDLYAGHDHTSMAVMLDHAKVEI
KQERQDHTEDTKEYKNLFTSDGLCATFKDLDQIFDNSDDAASGDETVRLMQVACGEESRW
AGRCVRAEELSKMFPTPPSMEAHAQPSPGFSLPDDVPPPRHLPPAGSPPPDAAIEDWSFV
FKPPTVYKYVGSSKYAPLTTLPSQLLPPVTLPPQAVYRPRCHREQGKRDADTDTDSHRNG
VKRSASPASESREGSVAARVRGRERGSPAPTPGPGAVAVPAPSAAPAAPRPAHSACPLLL
NVLLADTVLNVFRDHNFDSCTLCVCNAGPRVVGNIRGGDASTYLSPLPVEGGGEGRGVKS
GGVDDEPARCTCGFSAVVNRRLAHRAGLFYEDEMEITGVAEEPGGAGGGGGGGLKRRGGR
GGGAVRGAGRQQRVRARPHRRAPSTQRTAHDDLRLNLLEYSDGGSAAARALRAARTGSLG
GATPTPAPAPANSSAVHRWPFISARAPRSSRDVVRLMRRLRPLLXDAIQKRCCGARMWDG
VTGPLTWRQFHRLAGRGNEDLCEPQPVPPLLVGHDRDWVSLSPYALRHWERLALEPYSYA
RDVAFVVVGADCDALQDPLRMFFRELSTAYEACRLGRHRPVGRIARDGIVRAPASGGSAT
RDEWAGDLPXGRLGEYVRAYAEALRNVVPQLAALPVDRTLFEGTGGSSPARAEGSASPTP
EHEPEPAIGAPQSSTALCDADESGPPALVLYLVEPPAAPADRARALHCLLRLAATTHTHL
MHHNPLIKIVSLESVCEVWGMGGTEECAAAGGAGGVAGGAGGAGAREVRALAFSVFSGAR
RLLAHHANGKSLTGFGTAAHANLFLHSKDEKNRAAYKLFSPAWVLAAPRALKEVAETWGQ
GAGEGAVLFVSYCLSHDQRWLLAAATDARGELLDTAAINIHVPHRSRRRRNGPARRMGLT
KLMDFTLGVMSQAAQPWRLVVGRVGRIGHGELKGWSWLLSRKHLDRASNMLREICGSCSV
LYPTHVPCILSACLVSTEPDSCLRLMADRFTPDERFSQASIQSHLHTPRDVTATHILVFP
TSATTQSNQMPFEPPMANGEDNDMMFLNVDMGDEDMADDNINDLLIGDMFNNMWAPNSPR
RADDEPGGSPAPAHHPAHHHQAHEGQQEQVGTVFQQPLALGYLVSTAPLGAMPGWWWAGC
GHLRDACPAFLKNALHLHSVHAADDFTSLTQRRDHNTHPLDSQTTTDVLRYVLEGYNALS
WLALDGNTHDRXSCLPPLHVQVLMQLYHTAAALG
NT seq
5147 nt
NT seq
+upstream
nt +downstream
nt
aaggcgagcaggggtcgtgggagnncggcctgtcctacgagtgtcgttcgctgttgttca
aagcgctccataacctcattgaaagatgtctcctgtcgcgggacttcgtgaggctcggca
agtggtttgtgcaaccgtacgacggcgacgaggaggatgtcggcaagagtccatggcacc
tgtcgttctcgttcgcgttcttcctccacggcgagagcacggtgtgcgcgtctgtggacg
tgcgccagcatccgcccgtgcgcacgctcaccgccaagcggctcgccaagatcaactcgc
cggaccacaacggagatgctaaggtgatcctggcgccgttcgggctggaggggcggctga
cggggcgcgagtggggcgaggcggacgccgccaccgcgcgcctgctcgacgcctggcgac
atctctacccgctcgagcagggctgcggcgccgtcgaggtggtgtgcggcgggtcgcgca
tgcattacccgagcccgtacgcgctggtgacggacatggagccgggcgcgcgcgcgccgc
cgccgcgcatggcgccgcgcgcgctcaccgcgctcaccacgcccgcgccgcaccagagtg
cggaattgtgcttcagcgacccagccgccgataagaacgatgacttcgtcgaccccaccc
gcaaaacaccctgtacctgtaccaaattccttcgtcgcgaccgatgcagactcttgtcac
actttgatatctcttacttgggctcgccggcggggctagcgttgtgtgggtgcaggtggc
ggcggcgccgcgccccccgccccttccaccgccgcgccgctcccgcgcgcctgcgccacc
acgcgccgcccccgccgcccgcgcccacccgagggtcgctggtggcgggcgcgctggcgg
gcggcggcggcgcggggtcgccgggctcgtgcgccggctcgcccgcgcccggggcctccg
cgccgccctccgccgggccgccgccgccctcgcccggacaccacgccgcgcagggacagc
accagaccacgggcgcggtgccgacgacgctgcacacgccggcgcccacgcctgacccgc
atgcaccgccaactccggcgccgccatccttgccgccgcccaagctgtacaaccagggcg
agtccccgggctggtcgggctggtcggggtggggcggcgagccccccgaggcggcgcgcc
ggcccgtgctgccgcgcgcgccgcgccgccccgacccgctcgaggacgagaccgcgctgc
gcatgctctacgactacaccaccgtctacgcatggttggaacaccctgtgaaacgtttca
aaagcgaagagaactgctttcgcgaggagctggcgctaggcgtggctgccggcgaggatc
tgtacgcgggccacgaccacaccagcatggcggtcatgctcgaccacgccaaggtcgaga
tcaagcaggagcggcaagaccatacggaggacacaaaagagtacaagaatctgttcacat
cggacgggctgtgcgcgacgttcaaggacctcgaccagatattcgacaactcggacgacg
cggccagcggtgatgagacggtaagacttatgcaggtggcgtgcggcgaggagtctcgct
gggcgggccggtgcgtccgcgcggaggagctcagcaagatgttccccacgccgcccagca
tggaggcgcacgcgcagccctcgcccggcttcagcctgcccgacgacgtgccgccgccgc
gacacctgccgcccgccggctccccaccaccggacgccgccatcgaggactggtcgttcg
tattcaaaccaccgactgtgtacaagtacgtgggctcgtcgaagtacgcgccgctgacga
cgttgccgagtcagctgctgccgccggtgacgctgccgccgcaggccgtgtaccggccgc
gctgccaccgcgagcagggcaagcgcgacgcagacaccgacaccgactcgcatcggaacg
gtgtgaaacggtccgcgtctcccgcgagcgagtcccgggaggggtcggtcgcggcgcggg
tgcgagggcgcgagcgcggatcgcccgcgccgacgccgggcccgggcgccgtggccgtgc
ccgccccctccgccgcacccgccgcgccccgccccgcgcactccgcctgcccgcttctgc
tcaacgtgctgctggccgacaccgtgctcaacgtcttccgcgatcacaacttcgacagct
gcacgctctgcgtctgcaacgccggacccagggtggtgggcaacatccgcggcggcgacg
cttccacgtacctgagccctctgccagtggagggcggcggtgagggaagaggagtgaaga
gtggcggcgtggacgacgagcccgcgcgctgcacttgcggcttcagcgccgtcgtcaacc
gacgcctcgcccatcgcgccggacttttctatgaggatgaaatggagataactggcgtgg
cggaggagccgggaggggcgggcggcggcggcggcggcgggctgaagcgacgtggcgggc
gtggtggtggcgcagtgcgcggcgctggcaggcaacaacgcgtccgcgctcgcccgcacc
gccgcgcgccctccacacaacgcaccgcgcacgacgacctgcgactcaacctgctcgaat
actctgacggcggcagtgcggcggcgcgtgcgctgcgtgcggcgcgcacggggtcgctgg
gcggcgccacgcctacgcctgcacccgcgcccgccaacagcagcgccgtacatcgctggc
cttttatcagcgcccgcgcgccgcgctcttccagggacgtcgtcagattaatgcgtcgac
tccggccgctgctcngggacgcgatacaaaaacggtgctgcggcgcgcgaatgtgggacg
gtgtcaccggcccgctcacctggcggcagttccaccgactggccggccgcggcaatgagg
acctgtgcgagccgcagccagtgccgccactgcttgtcggacacgaccgcgactgggtct
cactgtctccgtacgcgctgcgtcattgggaacggctcgcgttagaaccatactcgtacg
cgcgtgatgtcgccttcgtcgtggtcggcgccgactgcgacgcactccaagatccactac
gcatgttcttccgtgaactctctaccgcgtacgaagcctgccggctcggacgtcacaggc
ctgtgggtcgcatcgcaagagacggcattgttcgagctcctgcctcaggtggttcggcaa
caagggacgaatgggctggcgacctgcccnncggacggctcggcgagtatgtgcgggcgt
acgcggaggcgttgcgcaatgtggtgcctcagctggcggcgttgccggtagaccggacgc
tgttcgagggcacgggcgggtcgtcccccgcgcgggcggagggctcggcgtcgcccacgc
cggagcacgagccggagccggcgatcggcgcgccacagtcgagcacggcgctgtgcgatg
cggacgaaagcgggccgccggcgttggtgctgtacctggtggagccgcccgccgcgcccg
cggaccgcgcgcgtgctctgcactgcctgctgcggctcgccgccaccacacacacgcatc
tgatgcaccacaatccactcatcaagatcgtgtcgctggagagcgtgtgcgaggtgtggg
gcatgggcggcaccgaggagtgcgcggcggcgggcggggcgggcggcgtggcgggcggcg
cgggcggtgcgggggcgcgggaggtgcgcgcgctggcgttcagtgtgttcagcggcgcgc
ggcgactgctggcgcaccacgccaacggcaagtcgctcaccggcttcggcaccgccgcgc
acgccaacctcttcctgcactccaaggacgagaagaaccgcgcggcgtacaagctgttct
cgccggcgtgggtgctggcggcgcctcgcgcgctgaaggaggtggcggagacgtgggggc
agggcgccggcgagggcgccgtgctgttcgtgtcctactgcctgtcgcacgaccagcgct
ggctgctggccgccgccaccgacgcccgcggcgagctgctcgacacggccgccatcaaca
tacacgtgccgcaccgctcgcgccggagacgcaacgggcccgcgcgccgcatgggcctca
ccaagctcatggacttcacgctcggcgtcatgagccaggccgcgcagccctggcgcctcg
tcgtcggacgcgtcggacggatcggacacggcgaactcaagggctggagctggctactgt
cgcgcaaacacctagaccgcgcgtcgaacatgctgcgcgagatttgcggcagctgctcgg
tgctgtacccgacgcacgtcccatgcatcctgtctgcgtgcctggtctccactgagccgg
actcgtgtctgcgactcatggctgatcggtttacgcccgatgagcggttctcacaggctt
ccatacagtcgcacctgcacacgccgcgtgatgtgacggccacgcatatactcgtcttcc
cgacctcagccaccacgcagtcaaaccagatgccattcgagccgccgatggcgaacggcg
aggacaacgacatgatgttcctgaacgtggacatgggcgacgaggacatggccgatgaca
acatcaacgacttgctaatcggtgatatgttcaataacatgtgggcgccgaactcgccgc
ggcgtgccgacgacgagccgggcggctcccctgcgcctgcgcaccatcccgcgcaccatc
accaggcgcacgagggacagcaggagcaggtgggcacagtattccaacaaccgctggcgc
tcgggtacctggtgtcgacggcgccgctgggcgcgatgccgggctggtggtgggcgggct
gcggccacctgcgcgacgcgtgtcccgccttcctcaagaacgcgctgcatctccactccg
tgcacgccgccgacgacttcacctcgctcacgcagcgccgcgaccacaacacgcacccgc
tcgactcgcagaccaccaccgatgtcctcagatatgtgctggaggggtacaacgcgttgt
catggctcgccttagacgggaacacgcacgatcggntctcctgcctgccgccgctgcacg
tgcaggtcctcatgcagctgtaccacacggcggcggcgctgggctaa
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integrated database retrieval system
