Manduca sexta (tobacco hornworm): 115452650
Help
Entry
115452650 CDS
T07401
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115452650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115452650
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115452650
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115452650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF2433
Motif
Other DBs
NCBI-GeneID:
115452650
NCBI-ProteinID:
XP_037294556
LinkDB
All DBs
Position
14:12150685..12248817
Genome browser
AA seq
778 aa
AA seq
DB search
MSRSRCGDFSSQNRRVGGPKTPVSSGQQEFARKGEIDRCLKKVTEGVETFEDIWQKVHNA
TNSNQKEKYEADLKKEIKKLQRLRDQIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVE
RETKTKAYSKEGLGAAQKLDPAQKEREEMSSWLISSIDALNLQVDQFESEVESLLVGKKK
RLDKEKQDRMEELKLKLEKHRFHIKKLETLLRMLDNMSVEVEQIKGIKEDVEYYIDSSLE
PGFEENDYIYDDIHGLDEIELSGVGLPSSATTDSNNSNDSAGSPASILSGTSPIRSPTLE
VHNHSTDSIDVEKKKKDELVTKPVKPLPLRAVNASAVGNSTCNVSSLLNHSAASTNRGGG
ACCSLSSALVSGATGASGASTPSKPPPAPSPPHAHAPHLPHAPHLPHAPHLQHVALAQHA
RPNNTEVVENGPVSNTTTHLPPPPTQPPPTSKSSSVPLVGVPSAPAPVGAAPPASAAAPP
SSSAPAPAAAPAPAPAARSAAPSPLTLNGPTQPAHHTTHTTHTTHTPHTPIHILNNGRVS
EAPSTPVGLSLSGSSAATPAVSAGSGGAAPAPGTPAPSAAPLGTASLKSMAQEAVQRAGL
DHHHQTVRRGVSMAQAHIPPLLGVAPLGPQPLNTDHQLQFQMMESAFYHMPHPSDSERTR
VYLPRNICRTPEYYNQVLLPHSDSVEFFQRLSTETLFFVFYYMEGTKAQYLAAKALKKQS
WRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaagtagatgcggagactttagcagccaaaatagaagagtgggaggccccaag
acgccagtttcaagcggccaacaagaatttgcaagaaaaggtgaaatagacagatgttta
aaaaaggtgacggaaggagtggaaacatttgaggacatctggcagaaggtgcacaatgcc
accaacagtaatcaaaaggagaaatatgaagcggacctcaagaaagagattaagaaacta
cagaggctacgggatcagattaaatcttggattgcctcaggagaaattaaggataagagt
acacttttagaatataggaaactaattgaaacgcaaatggagaggtttaaagtagtggaa
cgggaaacgaagacgaaggcatactccaaggaggggctcggtgcggcgcagaagctggac
cctgcacagaaggagagagaggagatgtcatcgtggctcatctcgtccattgacgcactt
aatttacaggttgatcaatttgagtctgaagtagagtcacttctagtgggtaagaagaaa
aggctggacaaagaaaagcaagaccggatggaggagctcaaactgaagttggagaagcac
aggttccacataaaaaaactcgaaacgctactaaggatgcttgacaatatgtctgtggaa
gttgaacagataaaaggcataaaagaggacgtggagtactacatagactcgtcactggag
ccgggcttcgaggagaacgactacatatacgacgacatccacgggctcgacgagatcgag
ctgagcggcgtggggctgccatcctccgcgaccaccgacagcaacaacagcaacgactcc
gccggctcgcctgccagtatactctctggtacgagtccaataagatctcccacgttggag
gtgcacaaccattcgacagactccatagatgtggaaaaaaagaaaaaagacgagctagtg
accaaaccggtaaaaccactgccgctgcgagcggtgaacgccagcgcggtcggtaatagc
acgtgtaacgttagttccttgctcaatcactccgcagcatccaccaatagaggcggcggt
gcgtgttgcagcctgagcagcgcgctggtgtcgggcgcgacgggcgcgtcgggcgcgtcc
acgcccagcaagccgccgcccgcgcccagcccgccgcacgcgcacgcgccgcacctgccg
cacgcgccgcacctgccgcacgcgccgcacttacagcacgtcgcgctcgcgcagcatgcg
cggcctaataacaccgaagtagtggagaatggtcctgtgtcgaacacaaccacgcatcta
ccgccgcccccaacgcaacctccgcccacgtcaaaaagttcgtcggtgccgctggtgggc
gtcccgtcggcgccggcgccggtcggagccgcgccgcccgccagcgcagccgcgccgccc
agcagcagcgcgcccgcgcccgccgccgcgcccgcgcccgcgcccgccgcgcgctccgcc
gcgccctcgccgctcacgctcaacggacccacgcagcccgcgcaccacaccacacacacc
acgcacaccacacacacgccgcacacgcccatacacatactcaacaatgggagagtgagc
gaggcgccgagcacgccggtggggttgtcgctgagcgggtcgagcgcggcgacgccggcg
gtgtcggcggggtcgggcggcgccgcgcccgcgcccggcacgcccgcgccctccgccgcg
ccgctcggcaccgcctccctcaagagcatggcgcaggaggccgtgcagcgagcaggactc
gaccatcaccaccagactgtaagacgaggtgtgtcgatggcacaagcgcacattccgccg
ctattaggcgtcgcgcctttaggacctcaaccgctcaacactgatcatcaactgcaattc
caaatgatggagtcggcgttctaccacatgccacacccctcggactccgagaggacgagg
gtatacctgccgagaaatatatgccggacgccagaatactataaccaggtgctgctaccc
cattcggactctgtagagttcttccagcggctatctacggagacattgttcttcgtgttc
tactacatggagggcacgaaggcgcagtacctcgcagctaaggcgctcaagaagcagagc
tggcggttccacaccaaatacatgatgtggttccagaggcacgaggagcccaaggtcatt
aatgaggaatatgaacagggcacatacatatacttcgactacgagaagtggggccagcgc
aagaaggagggcttcacgttcgagtacaagtacttagaggaccgcgacctgaactga
DBGET
integrated database retrieval system
