Manduca sexta (tobacco hornworm): 115452720
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Entry
115452720 CDS
T07401
Name
(RefSeq) ATP-dependent RNA helicase DHX30-like isoform X1
KO
K13185
ATP-dependent RNA helicase DHX30 [EC:
5.6.2.6
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115452720
03029 Mitochondrial biogenesis [BR:
msex03029
]
115452720
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115452720
Spliceosome [BR:
msex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115452720
Mitochondrial biogenesis [BR:
msex03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
115452720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_19
HA2_N
AAA_22
nSTAND3
AAA_16
AAA_30
nSTAND1
ABC_tran
DSRM_2
Motif
Other DBs
NCBI-GeneID:
115452720
NCBI-ProteinID:
XP_037299674
LinkDB
All DBs
Position
5:complement(4321005..4353541)
Genome browser
AA seq
1076 aa
AA seq
DB search
MMLRNFFTLRACLKKKFLVTENIFNLSNQLRNYNGIICNRSSYFTIFNENRSQRILYNLI
NQRCYCKEPPDASEVLRHEKELKKLTEIFPQPRVTLNELQTKTPDKIFEIQFKQNVVTPK
GKGKKKKAIQNNDWHCTYVFTWPEKIKFESTAISKRQAQEKAATLALHWLYINNRIDQNG
TPVYDKKVLNDLRSTLNEQIRVTISDKSAERIEKIWTEYESRIRDIYEDTFKEARQRLSV
SPVALNKDSTIDEDDFSENDADSMAEETDISETKTNVHPVFGKYITPPTQSAIQRRERAL
ERIFDKYNEELTPLPIDEYAEQITSTLDNNRVVVIVGAAGCGKSTRVPAAVLRHYGASMT
AVVSEPRRVAAIGLAERVASELGEDVGDSVGYQVRLHAKPPRPPGGAILYCTSGVLLRRL
QANPGLQGCSHVFIDEAHERDVNTDVTLLLLKRALDVNDHLKVVVMSATLDVGVFTKYFD
PCPVIEVPGRTFPVEVTHLKDIQKKFNLNLPNTLQNSGEEARKPQINCQEVAEVIKAVDK
SEKEGAILVFLPGWSEIKQTKELLEAHYGESSLHLILPVHSRLSTTDQAKMFSKPPLGIR
KIVLATNVAETSITIPDVVHVIDSGAHKENRIMENTGTASLETVWVSQAGAKQRTGRAGR
VQPGHCYRLYTKEKEAEFAEHTTPEILRIPLEQTVLDCKSYAPEDKVEDFLSQLPEPPTR
QAIRFAVNDLVDLGALTPSERLTRLGTLLSRLTLHPRLGRSLLHGAVLGAVVPVANVLTH
CADHLELFRNAPDRRDEVRSIKRKYSATSDHSALHWIQDEFELKLEEDGWSGVDAWCERY
GIRKERLGYVRALSSLHLQQILKSSIIDPASDVQELNRFCDIDQLYSAVLLSGANALVTS
RRRVKTKGKLATVTELYTSAGDRVHISSDSVNHNVIKGSPKAHILSYFGGHHSVERRALL
VSKSSQVTPHAVLLFAPGVVHSCVEESNEDTTIVTLPKHKLNIYLPTSHAEKILKAREML
WKTFQYYIERDFQSVEYDENTAISEFKVQLVKVIGRILVEAHTDYIEGKSNIEYVS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgatgttacgaaacttttttacattgcgagcctgtttaaagaagaagtttttagtgact
gagaatatttttaatttaagcaatcaattacgaaattacaatggtattatttgtaataga
tcatcatattttactatttttaatgaaaaccgttcacaaagaatactatataatttaata
aaccaaagatgttactgcaaagaaccgccagatgcatctgaagtgttgagacatgaaaaa
gagttaaagaaactaacagaaatatttccacaaccaagagtgactctgaacgaactacag
acaaaaacacctgataaaatatttgaaatacaattcaagcagaatgtggtcacaccaaaa
gggaaaggaaagaagaagaaggctattcaaaacaatgattggcactgtacttatgtgttt
acgtggcctgagaaaattaaatttgagagcacagcaatatcaaaacgtcaagcgcaagag
aaagcagccacgctggccctacactggttgtatataaacaatagaatagatcaaaatgga
acaccagtgtatgacaagaaagttctcaatgatctacggagtacactcaatgagcagata
cgagttactatcagtgataaatcagcagaacggattgagaagatatggactgaatatgaa
agtagaataagggacatttacgaagacacattcaaagaggcgaggcaaaggttatcagtt
agcccggtggctttaaacaaagattctactattgatgaagacgatttctcggagaatgat
gctgattcaatggcagaagaaacagatatatcagaaacaaaaacgaatgtacacccagtc
tttggcaaatatataacaccgcctacacaatcagccatacagaggcgggagagagcgttg
gagaggatatttgataaatacaatgaagagctaacacctctgccgattgacgagtatgct
gaacaaataacctcaacgctcgataacaatcgcgtagtggtcatagtaggggcagctggg
tgcggcaagtcgactcgcgtgccagccgctgtcctgcgccactatggagccagcatgaca
gcggtagtgtccgagccgaggcgagtggctgccatcggtctcgctgagcgagttgccagt
gaattaggagaggatgtgggagactctgtagggtatcaagttcgactccatgcaaagccg
ccgaggccacctggaggcgccatactgtattgcacctctggcgtgctgctgagaagattg
caggcgaatccaggtctgcagggctgctcgcacgtgttcatagacgaggctcacgagcgt
gacgtcaacaccgacgtcacgttgctgctcctcaagcgggcgttggacgtcaacgatcac
ttgaaggtggttgttatgagcgccacgctggacgtcggcgtgtttactaaatatttcgac
ccgtgcccagtcatagaagtgccgggacgcacgttcccagtggaagtgacgcatttgaag
gacatacagaaaaagttcaacctaaacctgcccaacactcttcagaacagtggcgaggaa
gcgaggaaaccacaaatcaactgccaagaggtagcggaagtaataaaagcagtggataag
agtgagaaagaaggcgcgatactagtgtttctcccgggttggtctgagataaaacaaacc
aaggaactgttggaggctcactatggagagtccagtttgcatttgatcttacctgtgcat
tctaggttgtctacaacagatcaagccaaaatgttcagcaagccgccactaggcatcagg
aaaatagtcctagcgacaaacgtagcggagacttccataacaatacctgatgttgtgcac
gttatagactccggggcgcataaggagaacagaattatggaaaatacggggacagctagt
ctggaaacagtgtgggtgtcgcaggcaggcgctaagcaaagaacagggagagcgggacga
gtgcagccgggtcattgctacagactctacactaaagagaaagaggctgagttcgctgaa
cacacaacgcctgaaatattgaggatacctctagaacaaacagtattagactgtaagtcg
tacgccccagaggataaggtcgaagatttcttgtcacaattacccgagccgccgacgcga
caagcgatcagatttgccgtcaacgatcttgtggatttgggcgccctgaccccctccgag
cgtctgacccgtctcgggactctcctgtcccgcctcacgctgcacccgcggctgggccgc
agcctgctgcacggcgccgtgctgggggccgtggtgcccgtcgcgaacgtgctgacgcac
tgcgccgaccacctcgaactgttcaggaacgcgcccgacaggagagatgaagtgaggtcg
ataaaacgcaagtacagcgcgacgtcagaccattccgcactccactggatacaggatgaa
ttcgagctgaagttagaagaagacggctggagtggggtcgacgcctggtgtgagaggtac
gggatcaggaaggaacgactgggatatgtcagagctctctccagtcttcacctgcaacaa
atactaaagtccagcataatagacccagcgtcagatgtgcaggagttgaaccggttctgc
gatatagatcagttgtacagcgctgtgttactgtccggcgcgaacgcactcgtcaccagc
aggaggcgtgtgaagaccaaggggaagctcgctactgtcacggaattgtataccagtgcg
ggggaccgcgtgcacatctcaagcgacagtgtcaaccacaacgtcatcaaggggtctccc
aaggcccacatcctgtcgtacttcggaggtcaccactcggtggagcggcgcgccctgctg
gtctccaagagttcgcaggtcacaccacacgcggtgctcctgttcgcacctggagttgta
catagttgtgtagaggagagtaatgaagacaccacgattgtaacattgccaaagcacaaa
ttaaatatatatttacctactagtcacgcagagaaaatcttaaaagccagagagatgttg
tggaaaacattccagtattacatagaaagagacttccaaagcgtagagtatgatgaaaat
accgcaatatccgagttcaaagtgcagcttgtcaaagtaattggaaggatattggtcgaa
gcacatacagactacatagaagggaagagcaatattgaatatgtaagctga
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