Manduca sexta (tobacco hornworm): 115452958
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Entry
115452958 CDS
T07401
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115452958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115452958
Spliceosome [BR:
msex03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115452958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_DCAF4
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_HPS5
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
115452958
NCBI-ProteinID:
XP_037299469
LinkDB
All DBs
Position
26:556811..565730
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AA seq
543 aa
AA seq
DB search
MSDDEEIVLPKKSKQVHYGSLEEQEKARLAALAAAAKEGVEDGAVKELGDIQISSEYMEL
EEEMSRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRD
LLSYLGEDAINKKLEEEEARIERDRGREGTWYHEGPPELRQARLWIARYSLPNAKKRLSK
CRAELQLAGSVRAAAKQEAQRRAAATAIYCSQIGDTRPISSCRFSSDSKMLITGSWSGLS
KVWSVPASRLLQQLRGHSCNLSGAAFHPHAVLPHHFRDKIEEAAEAAEAGESEVVQIMDT
GAGDAADKSEACTMATCAYDGTVYLWNFASESPLASLPGHSPYRVSRVEFHPSGRFLAAA
VFDHSWRLWDLTTATEVLHQEGHAKPVYCLAFQGDGSLAVTGGMDAFGRVWDLRTGRCVM
FLEGHLAGVLGADWAPQGHQLATAAADHQIKIWDLRRRAPIYTIPAHTHLISDVRYQSGG
GHFLASSSYDGSAKLWSHPAWHPLRTLAGHDNKVMSVDISPDSKYVATCSYDRTFKLWAP
ELA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaagagattgttttacccaaaaagagtaaacaggtccactatggatct
ctggaggagcaagagaaggccagactggccgctctggccgccgccgccaaggaaggagtc
gaggatggcgctgttaaagagcttggagacattcaaatatccagtgaatacatggagctg
gaggaggaaatgtcgcgagacaagaaggcgctgcttgaggagtttgagcgtagacggaag
gcgcggcaactcaatgtttctactgatgatgatgaggtccgtaggagtctcaggcagctg
ggcgagccagtgtgcttgttcggagaagggcctgctgagagaagagtgagactgagggac
ttgctcagctaccttggagaagatgcgataaacaagaagctggaagaggaagaggcgcgt
atcgagagggaccgcgggcgcgagggcacctggtaccacgagggacccccggaactgcgc
caggcgaggctgtggatcgcgcgatattccctccctaatgccaaaaaaagactgagcaag
tgccgcgcggagctgcagctggcgggcagcgtgcgcgccgccgccaagcaggaggcgcag
cgccgcgccgccgccaccgccatctactgcagccagattggtgacacccgtccgataagc
tcctgcaggttcagctccgacagcaagatgctcattacgggcagctggtcggggctgagc
aaggtgtggtcggtgccggcgagccgcctcctgcagcagctccgcggacactcctgcaac
ctcagcggcgccgccttccatccgcacgccgtcctgccgcaccacttcagggacaagatc
gaggaggctgcggaggctgcggaggctggtgagagtgaggttgtacagatcatggacaca
ggtgcaggagacgcggccgacaagtcggaggcgtgcacgatggccacctgcgcgtatgac
ggcaccgtctacttgtggaacttcgccagcgagtcccccctggcgtcgctgccgggccac
agtccgtaccgcgtgtcgcgcgtggagttccacccgtcgggccgcttcctcgccgccgcc
gtgttcgaccactcctggcgcctctgggacctcaccacagcgacagaggtgctccatcag
gagggtcacgcgaagcccgtgtactgtctggcgttccagggagacggctcgctcgccgtc
accggcggtatggacgcgttcggccgcgtgtgggacctgcgcacggggcgctgcgtgatg
ttcctggagggacacctggccggcgtgctgggcgcggactgggcgccgcagggacaccag
ctcgccaccgccgccgccgaccaccagataaaaatatgggatttgcgacgacgagctccg
atctacacgatacctgcgcacacgcatctcataagtgacgtgcggtaccagagcggcggc
gggcacttcctggcgagcagctcgtacgacggcagcgccaagctgtggtcgcatcccgcc
tggcacccgctgcggaccctcgccggacacgacaacaaggtgatgagtgtggacatatcg
cccgacagtaagtacgtggcgacctgctcctacgacagaaccttcaagttgtgggcgccg
gagctcgcgtag
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