Manduca sexta (tobacco hornworm): 115453482
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Entry
115453482 CDS
T07401
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115453482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msex03009
]
115453482
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115453482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_RIG_1st
WD40_RFWD3
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
115453482
NCBI-ProteinID:
XP_030038037
LinkDB
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Position
21:complement(6201632..6206997)
Genome browser
AA seq
891 aa
AA seq
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MAEKTSSRIFKGSRVLGYVSTHVPFVARFIKRRGETLLCTSVGKWFHTYGCDKFRLLSVS
GEHPGPITCMAGDNFHVYTGSENNIYAWRRGCELKHVYKGHNAAIKFIFPFGPHLISIDE
DNVLKIFDIKEETQYLELSFEAEHFQISTMCHPPTYLNKVLLGSIQGQLQLWNLRTSKLV
YTFSGWGSPVIVTEPAPAVDVVAIALGNRKIILHNLKFDQSVMDFVHDWGSVSSLSFRMD
GAPVMVTGSSAGHIVMWDLEERRVMSQVQSAHFGRIVGMQCLTSEPLMVTNSEDNSLKLW
IFDMPDGGARLLRKREGHALPPNMVSHCEPTGNNLLVAGSDSSLHIMNTVSETFNKSLGK
ASHNRKATKKKKRFEFDRLILPPITKLSSCMQRDKQWDSIASLHKDMYVATTWSYHKIKM
GEHKLKPPEINKGVSATCLTVTHCGNFVIIGYTDGQVHKFNMQSGIHRGHYGKAKKNAHK
GAVRGVETDICNQRVITAGADEKLKFWHFKNGDAPYHVMRLEESVTMTKCHRDSALLALA
NEDFTITLIDIDTMNIVRKFEGHTGKINDIAFDSQSRWLVSTSMDCTVCTWDIPSAQLVD
IFSLEQPCTSLSMSPTGDYLATTHINELGVFLWANKLLYDRIFLKPIDRNAVDIPKLKLP
STAPEKPDIDDIGVIDLGEEPEYKSPEQISQELITLSDQPTSRWLNLLNLDIVKKRNKPK
TPLTVPKSAPFFLPTIPSLELEFDLEKDNDGSDTKLLIPESLSTLSAFGKKLMKCESDED
FEKCTVKLKSLSPAAIEAEVNSMGPDVGGSIELMKQFLIMLNVMLNSNRDFELAQSYLGL
FLKTHTKVVSQVEELRNSLNTIEETASLAWAKLQNELLYDICIVKALKEMQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaacgagtagtcgaatatttaaggggtcaagagttttaggttatgttagt
acacatgtgccgtttgtggcaagatttataaaaagaagaggtgaaactttactatgtact
agtgttggaaagtggtttcatacttatgggtgtgataaatttcgattactgagcgtaagt
ggcgaacacccagggcctataacatgtatggccggtgacaattttcatgtctatacaggg
agtgagaataacatttatgcatggagaagaggctgcgagctgaaacacgtgtataaaggg
cataatgcagccattaagttcatatttccgttcggcccacatttaatttcaatagatgaa
gacaatgtattgaaaatatttgacattaaagaagaaacacagtatttagagttgagtttt
gaagcagagcatttccaaatttcaacaatgtgtcatcccccaacatatttaaataaagta
ttacttgggagcatccagggtcagctacaattatggaatttacgtacatcaaaattggtt
tacacattcagtggttggggatcgccggtaattgttactgagccggcaccggccgtcgac
gtcgtggctatagctctgggaaaccggaaaataattttacacaacttgaaatttgatcag
agtgtcatggattttgtacatgactgggggagtgttagtagcctatcgttcaggatggat
ggtgctcctgtaatggtcacaggtagcagtgcgggtcatattgtcatgtgggacttggaa
gagaggagggttatgtcacaagtccagtcggcacattttggccgtatagttggcatgcag
tgtcttacatctgagccactaatggtgaccaactcagaggacaattcattgaagttatgg
atcttcgacatgcctgacggtggagcaagactcttgagaaagagggagggccatgcatta
ccgcctaacatggtgagccattgtgagccgacaggaaacaatctcctggttgctggcagt
gacagcagcctgcatattatgaacactgtttcggaaacatttaataaaagtcttggcaaa
gcttctcataacaggaaagctactaagaaaaaaaagagatttgaatttgaccgtcttatt
ttgccaccaatcacaaagttaagctcttgcatgcaaagggacaaacagtgggacagcata
gcttctttgcacaaagacatgtatgtggcaacaacgtggtcataccacaaaataaagatg
ggtgaacataagttaaaacctccggaaatcaacaaaggagtctccgcaacttgtctgact
gtaacccactgtgggaactttgtgattattggttacactgatggtcaggtacataaattt
aacatgcaatctggaatacacagaggtcattatggaaaagctaagaagaatgcacataaa
ggtgctgtccgtggagtggaaactgacatctgcaaccagagagtgatcacagctggagct
gatgagaagcttaagttctggcattttaaaaatggtgatgcaccatatcatgtgatgaga
ttagaagagtcggtgacaatgacaaagtgccacagggacagtgcactgttggccctcgcg
aatgaagacttcaccattacccttatagatattgacaccatgaacattgtaaggaagttt
gaaggtcacactgggaaaattaacgatatcgcctttgattctcagagcagatggcttgtc
agtacatctatggattgcactgtttgtacgtgggatatacctagtgctcaactagttgat
atattctcgttggaacaaccgtgtacgtctttgagtatgtcaccaactggcgattactta
gcgacaacgcatatcaacgaactgggcgtgttcctctgggctaacaaactgttgtacgat
agaatattcttgaaaccaattgatagaaatgctgttgatattcctaaattgaaattacca
agcacggctccagaaaaaccagatatagacgacataggtgttatagatctaggtgaagag
cctgaatacaaatcccctgaacaaattagccaagaacttatcaccttgtccgaccaaccg
acgtcaaggtggctcaatctgctcaatttggatattgttaagaaacggaataaaccgaaa
acaccactgacggtgccaaaatcagccccgttctttttacccacaattccgagcttggaa
cttgaatttgatttggagaaagacaatgatggcagcgatacaaagttgttaataccggaa
tctttatcgacactcagcgcgtttggtaagaaattaatgaaatgcgaaagtgatgaagat
tttgaaaagtgtacagttaaattgaaaagtctatcgccggctgcgattgaggccgaagtc
aacagcatgggaccagatgttggcggctcaatagaactcatgaagcaattcctcataatg
ttaaatgtaatgttgaacagtaatagggactttgaattagcgcagtcgtatttaggttta
ttcttaaagacacacacgaaagtggtctcccaagttgaagagttgagaaattcactgaac
actatcgaagaaacggcgtcgctggcgtgggctaaactgcaaaatgagttgctgtatgac
atttgtatagtaaaagcgttaaaagaaatgcaataa
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