Manduca sexta (tobacco hornworm): 115453992
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Entry
115453992 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex04137
Mitophagy - animal
msex04140
Autophagy - animal
msex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115453992
04137 Mitophagy - animal
115453992
04148 Efferocytosis
115453992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msex03000
]
115453992
Transcription factors [BR:
msex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115453992
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
bHLH_HIF1A
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
115453992
NCBI-ProteinID:
XP_037293950
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Position
13:complement(836050..926423)
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AA seq
970 aa
AA seq
DB search
MLVNGYGEQYADQCSVGGHFEEAGWNVQCQLNQQWGHQSVNNVCSFGAYGPEYPGQYYRS
VPYQYGVPPPYNPPKVYPRQVAYVQQPIVPNLPCHQAQQWDYNSMCFNVDGQACQYTNVV
DLEDFMNNEKRKEKSRVAARCRRTKEMQIFSELTAALPAKKEEVEQLDKASVMRLAISYL
RARDVVSMLPDVDKEQPKVQNPKGYEELSSELSYMKALDGFVMVLSQQGDIVYCSENIAD
HLGVSQMEIMGQSVFEFSHLCDHEEIREALRPNGGGRRDLLLRLKCTLTSKGRNVHLKSA
SYKVIHITGHMLMPTNGKERNNNKEDKKIDDDKKASGASLVAVGRPIPHPSNIEIPLDSK
TFLSKHSLDMKFTYVDEALLNTLGFEPDELVGRSLYDYHHAADSASMIQQFKSLFSKGQC
ETGQYRFLAKASGYAWVQTQATVITDKQQKPISVVCVNYVISGIECKDEVFAAHQVQHAD
LKPPVAVTAPVPAPAPLCAPVAPPANGAIVAAVPSDDERPIPVTELIFAPRKKEMNKGFL
MFSQDEEGLTMLKDEPEDLTHLAPTAGDACIPLENSPFDMFDDFILSDNYCSLLGDELAN
ASPVDSLTPDSLLLSSPEPQENESSCEQSSLLTELSLDAFDGTRSDNDIDDGNSPFIPTS
DELPVLEPAVMWGALPDSVSLAXPQPTETHNASPAPALQRLLTASTTGPPPQDLITNIYS
DQGLIPSRSVASWDTGVKRVLKQEQEPCAKRAKRSPSPAPARASSKPSSSVLMNLLDTPQ
PSPQSQHNMHTNYQMIQNAQALGGQAMNRNSIQIPVINIVPTINNQISRTNTPINQVIRT
SMASPMSPLSLSIGSPMYSLPPSPSSYNSPAMSPAQRDRMMSPYSSSPSLSPMGKYQVYS
PGRLMSPAGVIQGCDPYLTTKMQPSPGFPMQTEMLLDSNVPLTTSDFWPDTDMLQGTSDL
LTAFDDVKLG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgaacgggtacggggagcaatatgctgaccagtgttccgtcggaggacacttc
gaggaggccggatggaatgtgcagtgtcagttgaaccaacagtggggacatcaatccgtc
aataatgtgtgcagtttcggtgcttacggtccggaataccccggacaatattataggagt
gttccgtaccagtatggtgtacctcctccgtataatcctccgaaggtgtatcctcgtcag
gtcgcctatgtacagcagcctattgttccaaacttaccctgtcatcaagctcagcaatgg
gactataatagtatgtgcttcaatgtggatggacaggcttgtcaatacacaaatgttgtt
gacttagaagattttatgaataatgagaaacggaaggagaaatcgcgtgtggctgcgcga
tgtcgtcgcaccaaggagatgcagatcttctcggagctcaccgccgccctcccggccaag
aaggaggaggtggaacaactggacaaggcctccgtgatgcgtctagctatatcctacctt
cgcgcccgggatgtcgtctccatgcttcctgatgttgacaaagagcagcccaaagtgcag
aatccgaaaggatatgaggagttgtcttcagaactatcgtacatgaaagccttggatgga
ttcgtcatggtgctttcacagcagggcgacatagtgtactgcagcgagaacattgccgac
catctgggcgtgtcacagatggagataatgggccagagcgtgttcgagttcagccatctg
tgtgatcacgaggagatccgtgaggcgctgcgccccaatggcggcggacgccgtgatctg
ctgctacgtctcaagtgcaccctcaccagcaagggacggaacgtgcatctcaagtcggct
tcttataaggtgattcacatcaccggtcacatgctgatgccgaccaacggaaaggagcgc
aacaacaacaaggaagataagaaaatcgacgacgataagaaagcgagcggcgcctctctt
gttgccgtcggtcggccgataccgcacccctccaacatcgaaataccgctggacagcaag
accttcctctccaaacacagcttggacatgaagttcacttatgtggacgaggctttgctg
aatactctcggattcgaaccagacgagctggtcggcagatcgctttacgattaccaccat
gcagccgacagtgcttctatgattcagcagttcaagtctctgttctcaaagggacaatgc
gagaccggccaatatcgcttcctggccaaggctagtggctacgcctgggtccaaacccag
gccaccgtcatcaccgacaagcaacagaagccaatcagcgtcgtgtgcgtcaactacgtc
atcagcggtatcgagtgcaaagatgaggtgttcgcagcacaccaagtgcagcacgccgat
ctgaagcccccggtggcagtgactgcacccgtacccgcgcccgcgccgctctgtgcgcct
gtcgcgccgcctgccaacggcgcaatagtcgccgccgtaccctccgacgacgagcgacct
atacccgtcacagagctcattttcgcaccgcgaaagaaagaaatgaataaaggctttctc
atgttctcccaagacgaggagggacttacaatgcttaaagacgagccggaagatctgacc
catttggcacctacggctggtgacgcttgtatccctctggagaacagcccgtttgacatg
ttcgatgattttatactaagcgacaattactgtagccttttgggtgatgaattggctaat
gcgtcaccggtagactctctaactcctgattcgttgttattatcttcgcccgaacctcag
gagaatgaatcgtcatgtgaacaatcatcgttattaacagaactgtcgttggacgcgttt
gacggcacgaggtcggataatgatattgacgatggaaactcgccgttcataccgacgagc
gacgagctgccggtgctggagccggcggtgatgtggggcgcgctgcccgacagcgtcagt
ctggctncgccccagcccacggagacacacaatgcctccccagcaccggcgctacagcgc
ttgctcactgcgtcgaccacaggcccgccgccacaggatctcattaccaatatatattca
gatcaaggtctcataccgagcagaagcgttgcgtcttgggatacgggtgtgaaaagagta
ttgaagcaagagcaggagccgtgcgcgaagcgtgctaagcgcagcccgtccccggcgccg
gctagagcgagtagcaagccctcgtcgagcgtcctcatgaatctgctggatacgccacaa
ccgtcaccccagagtcaacataatatgcacaccaattaccagatgatacaaaatgcacag
gcattaggaggccaagccatgaacagaaacagcatccagatacctgtaataaacatcgtt
ccgaccataaacaatcaaatatcgcgtaccaacacacctatcaatcaagttatacgcaca
agcatggccagcccgatgtctcctttaagcctgagtatcggcagtccgatgtattcgctc
ccgcccagcccgagcagttacaacagtcccgccatgagtcctgctcagagagaccgcatg
atgagtccgtattcctcttcgccatcgctgtccccgatgggtaagtaccaagtgtacagt
ccagggaggttgatgtcgccggcgggcgtgatccagggctgcgatccgtacctcacgacc
aagatgcaacccagcccggggttcccgatgcaaacagaaatgctcctggattcgaacgtg
ccgctgaccacgtccgacttctggccggacacggacatgctccaaggaacaagcgactta
ctaacggctttcgatgacgtcaaactaggctag
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