Manduca sexta (tobacco hornworm): 115454061
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Entry
115454061 CDS
T07401
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115454061
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115454061
Spliceosome [BR:
msex03041
]
Complex C
Other components
Complex C specific factors
115454061
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
AAA_7
ABC_tran
nSTAND3
AAA_5
DUF7654
RsgA_GTPase
Cas3-like_C_2
Rad17
Motif
Other DBs
NCBI-GeneID:
115454061
NCBI-ProteinID:
XP_037292738
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All DBs
Position
2:2971565..3033209
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AA seq
724 aa
AA seq
DB search
MFGNRPKFIKPGDEPLYPTRNKDGLIETLINPNIDSALSVDNDSSTSFVYNRYHHLPMES
QRQKLPVFQYRNHILYLLEKHQTLVLIGETGCGKSTQVPQYLQEIGHKVCVTQPRVTAAV
SLACRVAEERGEAVGASVGYAAAMMSVRTTETGIVFMTEGVLLREMFASPLLMQYSCIVL
DEVHERSQMTDVLMGLLKKIAKKRKTLKLVISSATMDAEFLKEFFDLSDKRGTKPSTSVI
MAMQGRTHPIDILYAEEPVPDYVQATVDTVIKVHEGEPFGDILAFLTSQEEINIALEKLQ
LYADDNNEKNKLRRHFPSGMRAADLSVVPLYGSLPHHRQVRAFQSAAHNVRKVVLATNIA
ETSVTIPGVVYVIDCGFHKLPYFDPAVGVESLAVCAVSRNNAIQRAGRAGRTGRGKCYRL
YTEAEYDKLPPSVPPEMCRSDLSSVLLQLKALGIHNLLRFTFPTPPPAKSLLSSLETLYA
LKAIDKQGDLTPHTGVYMAELPVKPMCAKMLCNSGEFGCIDEALSIAAMLQVDGVFAKPS
SGKGVVAARISRRNNFEVAEGDIIMYLNIMDAYIKLKSSHSDQHRSRKACKDWCQKMYLN
YKVMEKAFEIRESLEKLLKGKFQMENKTFEGIDLGTAKCTRIMKCVLSGHIPQAASLSTD
ATYRSIRGAALHISPDSCLYRTQQPKWVVFTSVQSTGDKTYMRDLMVIQKDWLLEIAPHY
YTET
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaaacagacctaagttcataaaacctggtgacgaacccctctacccaacacga
aacaaggacggcctcatagagacattaattaacccaaacatagactcagcactatcagta
gacaatgattctagcaccagttttgtttacaaccggtaccaccacctgccaatggaaagc
cagagacagaagctcccggtattccagtacaggaatcatatattgtatctgttggagaag
catcaaacgcttgtgttgattggtgagacgggctgtggtaaatctacgcaagttcctcag
tacctgcaggagataggacacaaggtgtgcgtgacgcagccgcgcgttaccgctgcggtg
tcgctcgcgtgccgcgtggccgaggagcgcggcgaggcggtgggcgcgagcgttggatac
gcggccgccatgatgagcgtgcgcacgacagagacggggatagtgttcatgacggaaggc
gttcttctacgagagatgttcgcctcgccactgctcatgcagtactcctgcattgtgctg
gacgaggtccacgagcgttctcaaatgacagatgtcttgatgggtctactgaaaaaaatt
gccaagaaacgcaagaccctcaagctagtgatatcatcagccacaatggacgcggagttc
ctgaaggagttcttcgacctgtcggacaagcgcggaaccaaacccagcacttcggtcata
atggcgatgcaggggcggacgcatccgatagacatactgtatgctgaagaaccagtgccc
gactacgtacaagcgacggttgacacggtcatcaaagtacacgaaggggagccgttcgga
gacattctggcttttttgacctctcaagaagaaataaatatagctctagagaagctgcag
ctgtacgccgacgacaacaacgagaagaacaagctccgccgacacttccccagcggcatg
cgagctgccgaccttagcgtcgtgccgctctacggcagtctgccacaccatcgacaggtg
cgcgcctttcagtcggcggcacataacgtgaggaaggtggtgctggccaccaacatagcc
gagaccagcgtcaccatacctggagtggtatatgtgatagactgcggcttccacaagctg
ccgtacttcgatcccgcggtgggtgtggagagcctcgccgtgtgcgcggtctcacgcaac
aacgccatacagagagcgggccgggccggacgcaccggacgcggcaagtgctacagatta
tacacagaggcggagtacgacaagctgcctccctccgtgccccccgagatgtgtcgcagc
gacctctcctctgtcctgctgcagctcaaggcgttgggcatacataacttattaaggttc
acattccccactccccctccagctaagagcttgctctctagtctagaaactctatacgct
ttaaaggccatagacaagcaaggagatctgaccccacacactggggtttacatggcagaa
ttgcctgttaaacccatgtgtgccaagatgctgtgcaacagcggcgaattcggatgtatc
gacgaggcgttgtctatagccgccatgttgcaagtggacggagtgttcgccaagcccagc
agtgggaaaggggtagtcgcagctaggatatctagaaggaataactttgaagtggctgaa
ggcgacataataatgtatttaaacataatggacgcttacattaaactaaaatcatcgcat
tccgatcaacacagatcaaggaaggcgtgcaaagactggtgtcagaaaatgtacctcaat
tacaaggtcatggagaaggcattcgaaataagagagagtttggagaaacttttaaaagga
aagttccagatggagaacaaaacttttgaaggaatagatttggggacggcaaaatgcaca
cgcataatgaagtgtgtattgtcgggccacatcccgcaggcggcgagtctcagcaccgac
gccacctacaggagcatccgcggcgccgcactacacatcagccccgacagctgcctctac
aggacgcagcagcccaagtgggtggtgttcacgagcgtgcaaagtacgggagacaagacg
tacatgcgggacctcatggtgatacagaaggactggctgctcgagatagcgccgcattac
tacaccgagacttga
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