KEGG   Manduca sexta (tobacco hornworm): 115454061
Entry
115454061         CDS       T07401                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
msex  Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:msex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msex03041]
    115454061
Enzymes [BR:msex01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     115454061
Spliceosome [BR:msex03041]
 Complex C
  Other components
   Complex C specific factors
    115454061
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 HA2_N AAA_19 AAA_7 ABC_tran nSTAND3 AAA_5 DUF7654 RsgA_GTPase Cas3-like_C_2 Rad17
Other DBs
NCBI-GeneID: 115454061
NCBI-ProteinID: XP_037292738
LinkDB
Position
2:2971565..3033209
AA seq 724 aa
MFGNRPKFIKPGDEPLYPTRNKDGLIETLINPNIDSALSVDNDSSTSFVYNRYHHLPMES
QRQKLPVFQYRNHILYLLEKHQTLVLIGETGCGKSTQVPQYLQEIGHKVCVTQPRVTAAV
SLACRVAEERGEAVGASVGYAAAMMSVRTTETGIVFMTEGVLLREMFASPLLMQYSCIVL
DEVHERSQMTDVLMGLLKKIAKKRKTLKLVISSATMDAEFLKEFFDLSDKRGTKPSTSVI
MAMQGRTHPIDILYAEEPVPDYVQATVDTVIKVHEGEPFGDILAFLTSQEEINIALEKLQ
LYADDNNEKNKLRRHFPSGMRAADLSVVPLYGSLPHHRQVRAFQSAAHNVRKVVLATNIA
ETSVTIPGVVYVIDCGFHKLPYFDPAVGVESLAVCAVSRNNAIQRAGRAGRTGRGKCYRL
YTEAEYDKLPPSVPPEMCRSDLSSVLLQLKALGIHNLLRFTFPTPPPAKSLLSSLETLYA
LKAIDKQGDLTPHTGVYMAELPVKPMCAKMLCNSGEFGCIDEALSIAAMLQVDGVFAKPS
SGKGVVAARISRRNNFEVAEGDIIMYLNIMDAYIKLKSSHSDQHRSRKACKDWCQKMYLN
YKVMEKAFEIRESLEKLLKGKFQMENKTFEGIDLGTAKCTRIMKCVLSGHIPQAASLSTD
ATYRSIRGAALHISPDSCLYRTQQPKWVVFTSVQSTGDKTYMRDLMVIQKDWLLEIAPHY
YTET
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgtttggaaacagacctaagttcataaaacctggtgacgaacccctctacccaacacga
aacaaggacggcctcatagagacattaattaacccaaacatagactcagcactatcagta
gacaatgattctagcaccagttttgtttacaaccggtaccaccacctgccaatggaaagc
cagagacagaagctcccggtattccagtacaggaatcatatattgtatctgttggagaag
catcaaacgcttgtgttgattggtgagacgggctgtggtaaatctacgcaagttcctcag
tacctgcaggagataggacacaaggtgtgcgtgacgcagccgcgcgttaccgctgcggtg
tcgctcgcgtgccgcgtggccgaggagcgcggcgaggcggtgggcgcgagcgttggatac
gcggccgccatgatgagcgtgcgcacgacagagacggggatagtgttcatgacggaaggc
gttcttctacgagagatgttcgcctcgccactgctcatgcagtactcctgcattgtgctg
gacgaggtccacgagcgttctcaaatgacagatgtcttgatgggtctactgaaaaaaatt
gccaagaaacgcaagaccctcaagctagtgatatcatcagccacaatggacgcggagttc
ctgaaggagttcttcgacctgtcggacaagcgcggaaccaaacccagcacttcggtcata
atggcgatgcaggggcggacgcatccgatagacatactgtatgctgaagaaccagtgccc
gactacgtacaagcgacggttgacacggtcatcaaagtacacgaaggggagccgttcgga
gacattctggcttttttgacctctcaagaagaaataaatatagctctagagaagctgcag
ctgtacgccgacgacaacaacgagaagaacaagctccgccgacacttccccagcggcatg
cgagctgccgaccttagcgtcgtgccgctctacggcagtctgccacaccatcgacaggtg
cgcgcctttcagtcggcggcacataacgtgaggaaggtggtgctggccaccaacatagcc
gagaccagcgtcaccatacctggagtggtatatgtgatagactgcggcttccacaagctg
ccgtacttcgatcccgcggtgggtgtggagagcctcgccgtgtgcgcggtctcacgcaac
aacgccatacagagagcgggccgggccggacgcaccggacgcggcaagtgctacagatta
tacacagaggcggagtacgacaagctgcctccctccgtgccccccgagatgtgtcgcagc
gacctctcctctgtcctgctgcagctcaaggcgttgggcatacataacttattaaggttc
acattccccactccccctccagctaagagcttgctctctagtctagaaactctatacgct
ttaaaggccatagacaagcaaggagatctgaccccacacactggggtttacatggcagaa
ttgcctgttaaacccatgtgtgccaagatgctgtgcaacagcggcgaattcggatgtatc
gacgaggcgttgtctatagccgccatgttgcaagtggacggagtgttcgccaagcccagc
agtgggaaaggggtagtcgcagctaggatatctagaaggaataactttgaagtggctgaa
ggcgacataataatgtatttaaacataatggacgcttacattaaactaaaatcatcgcat
tccgatcaacacagatcaaggaaggcgtgcaaagactggtgtcagaaaatgtacctcaat
tacaaggtcatggagaaggcattcgaaataagagagagtttggagaaacttttaaaagga
aagttccagatggagaacaaaacttttgaaggaatagatttggggacggcaaaatgcaca
cgcataatgaagtgtgtattgtcgggccacatcccgcaggcggcgagtctcagcaccgac
gccacctacaggagcatccgcggcgccgcactacacatcagccccgacagctgcctctac
aggacgcagcagcccaagtgggtggtgttcacgagcgtgcaaagtacgggagacaagacg
tacatgcgggacctcatggtgatacagaaggactggctgctcgagatagcgccgcattac
tacaccgagacttga

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