Manduca sexta (tobacco hornworm): 115454077
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Entry
115454077 CDS
T07401
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115454077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msex03036
]
115454077
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
115454077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
115454077
NCBI-ProteinID:
XP_037297269
LinkDB
All DBs
Position
22:7507960..7522697
Genome browser
AA seq
1049 aa
AA seq
DB search
MDGLIHAALEAEVILNRAKHVNTNLSQFGSGVTDHKMTWTHDKIHLAESVDESRMKFQRN
SVGSASKSNEKFDLFKNLHELYNELSKDESSQNIYQGLKTTSYLLEKLLANYNLNTLIIN
LYPGNKGYSLSLKINGNTQYLNPPDGHMSMNQDETLIETPRWPYEEEELLSYIDNEELPV
VLLDLLESEHSCLFYSGCIIAQVRDYRQAYPSFLCDTHHVLLRPTNQSIITDAMCIGGRC
GWAGEERSALEAVEAALVHAAAPPLCLDPRPAVGLLAARLHAAPRLFNTPRIRRQAKKFS
QVAVNRKRKLDQFTHYHGLELLDLIHRQRAKNSRQSVPHTRLTSKYPKKPPEVFKPIEAP
KMEPLPLALPSEPSGPLRLARAYERPRPTPDCQPQLVEEYILETEKTSPHAGAGFFHIKL
SILQRPSDQEFLGELYVDRDHVEGERNGAACRFTLGSRLQANKYIQQFTEIFTEEGRKSV
RIKHIVPGQLPRVSFTGGMRELGQQLLLQQRNAAAAASSATVPTHATTVPVVTTAIAATP
NTHTNVRQLPILQAQLQQVGNVATVGNVVGNVATVSNVANVNNAGNVVGNVTAPTETALK
QQPSPTTPRLSPQASTNQLLAQQLTNPQQPLNTPKMQSAIIHIQHQHPLMSTAGTSQVQN
IQYTTTSTTQQKTTITKPRTTNPAITALVTSLMNSAQQFQAAAANQNAAKAAVSTANSNA
TILNLLNSAPAAMTHAGATPAADGALGATLSAPLAAPLAAPHASPHAATLAAPHAAPLSA
PLAAPLSAPHSGTLAAPLASPHNAQHATLDTHKLLGRVSIAGARLLAATTASHTIPTYTQ
QGVGVQVMSGFTRENESTNVSSSESALLERLMGPETPVAPASQPQPVCHLQGLSLTSLQG
LQGIQGLQNVQVQIPGLSAPISLSLNVSGAPSGLLVSVPPTTSVVLTNQPSMLSLPIAQL
VPGVKGAVRGGAVQVVRGARAARPAPRVAAPRAPAPAAPAAPAAHASPAHAPAPAHSPAA
TGTTQFITQGRAQPLTVQHVRRKSNADSS
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggatggtttaattcacgcggcattggaagctgaggtaattcttaaccgggcgaaacat
gtgaatacaaatttatcacaatttggcagtggtgtcacagaccataaaatgacttggacg
cacgataagatacatctagcagaatctgttgatgaatctagaatgaagtttcaaagaaac
tcggttggttccgcgtccaaaagtaatgaaaaatttgacctgttcaaaaacttgcatgaa
ctttataatgaactaagtaaggatgaatcgtcacaaaacatctatcagggtcttaagaca
acatcatatttattggaaaagttgttagcaaattataatctcaatacattaataattaac
ctgtatccagggaataaaggatattcactatctcttaaaattaatggtaatacacaatat
ttaaacccaccagacggccatatgtctatgaatcaagatgaaacattgatagagacccct
cgatggccatatgaagaagaagagttacttagttacatagacaatgaagagttaccagtg
gtgttattagatttgttagagtccgagcactcatgcctgttttattctggatgtataatt
gcgcaagtcagagactatagacaagcatacccaagtttcctatgtgatactcatcatgta
cttttaaggcctacaaaccagagcataataaccgatgccatgtgtatcggtggaagatgc
gggtgggcgggggaagaacggagtgcgttagaagcagttgaggccgcgttggtacacgct
gccgcaccaccgttgtgtcttgaccctcgacccgctgttggacttttagcagcaagatta
catgcggctcctaggctatttaatacaccacgaatcaggagacaagcgaaaaagttttca
caggtggctgtaaacagaaaaaggaaattggatcagtttactcactatcatggtttagag
ttgttggatttaattcatcggcagagagcgaaaaacagtcgacagtctgtaccgcacaca
agacttacttctaaatatcccaaaaaaccaccagaggtgttcaaacccatagaagctcca
aaaatggagcctttaccgctagcattaccatctgagcctagtgggccactacgcctggcc
cgcgcctacgaacgccctcggcccacgcctgactgccaaccgcaactagtcgaagaatac
atactggagactgagaagacatcaccacacgcgggcgcgggcttcttccatattaaatta
tcgatattacaaaggccgtccgatcaagagttccttggggagttgtacgtggatagggat
catgttgaaggtgaaaggaatggcgccgcctgccggtttactttaggttcgagattacaa
gcaaacaaatacatacaacagtttacggagatatttacagaagaaggtcgtaagtcagtt
agaataaaacatattgtacctggtcagctgccaagagtatcattcactggaggaatgaga
gaattgggtcagcagctgttgctgcagcagcggaacgcggccgccgccgccagcagcgcc
accgtgccgacgcacgccaccacagtgcccgttgtcaccactgcaatagcagcaacgccg
aatactcatacgaacgttcgtcagttaccaatcctgcaggcacaactacaacaagtgggc
aatgtcgcaacagtgggcaacgtggtcggtaacgtggccaccgtgagcaacgtggccaat
gtgaacaacgcgggcaatgtggtgggcaatgtaactgctcccacggaaaccgctctcaaa
caacagccgtcgccgacgacgccgcgattgtctccgcaggcatcgacgaatcaattgctg
gcacagcagctgacgaatccgcagcaaccgctgaacacacccaagatgcagtcggcgatc
atacacatacagcaccaacatcctttaatgtccactgcgggcacatcccaggtacaaaac
atccagtatacaactacctcgacgacacagcaaaagacgaccattactaagcctcgaaca
acgaatccagccatcactgcgctcgttactagtctcatgaattccgcgcaacagtttcaa
gcagcggcggcgaatcaaaatgcagctaaagcggctgtcagcacagccaacagcaacgcg
acgattctgaacctgttgaacagcgcgccggccgccatgacgcacgccggcgccacgccc
gccgcggacggcgcgctcggtgccacgctgtccgcgccgctcgccgccccgctcgccgcg
ccgcacgcctccccgcacgccgccacgctcgccgccccgcacgccgctccgctgtcggcg
ccgctcgcggctccgctctcggcgccgcactcgggcacgctggccgccccgctggccagc
ccgcacaatgcgcaacatgctacgctggatacgcacaagctgctcggccgcgtgtccata
gccggcgccaggctactcgcagccaccaccgcgtcgcatactatacctacttatacccaa
cagggtgtgggtgtgcaagtcatgagtgggttcacgagagagaacgaatcgaccaacgtg
tcaagtagcgaaagcgcattgttggaacggttgatggggccggagacaccggtcgcgccc
gcctcacagccacagccagtttgccatttgcagggtcttagtctgacttctctgcaaggt
ttgcaaggcattcagggtcttcaaaacgtgcaagtacagatcccaggtctgtcggcccca
atctctctatcactcaacgtgtcgggcgctccgtcgggcctgctggtgtcagtacctccc
accacttcggtcgtacttaccaaccaaccctccatgctttccttgccaatagcgcaacta
gtgccgggcgtgaagggcgcggtgcgcggcggcgcggtgcaggtggtgcgcggcgcgcgc
gcggcgcggccggccccgcgcgtcgccgccccgcgcgcgcccgcgcccgccgcgcccgcc
gcgcccgccgcgcacgcctcgcccgcgcacgcgcccgcgcccgcgcactcgcccgccgcc
acagggacaacacagttcataactcagggacgggcgcagccattaacagtgcaacacgtg
agacggaaatcaaacgcagacagttcatag
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