Manduca sexta (tobacco hornworm): 115455194
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Entry
115455194 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115455194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115455194
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115455194
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115455194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
YceM-like_C
Motif
Other DBs
NCBI-GeneID:
115455194
NCBI-ProteinID:
XP_037301004
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MPAASFGSISQAPPNGDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVAXPIG
EFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDS
IDLLQNSGLQFRKHEEDGIEPLEFAELLMSSGLVLIDNIKWLSFHSGYDFGYLLKLLTDQ
NLPQDENDFFDSLRMYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSH
LTGMAFFKIKEIFFDDNIESSSGHLYGLGAPFSVNVNNFQDNGENGNSS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagcaagttttggttcaatatcacaagctcccccaaatggcgactgtgggata
aaagatgtgtggaaccataatttacatgaagaatttcaaataataagacaggtagtgcaa
aagtatcactgggtggctatggatacagagtttcctggtgttgtggcancgccaattggt
gaattcagatctactgcagactatcaataccaactactcaggtgcaatgttgatctttta
agaattatacaacttggattaacatttatggatgaaaatggaaaaacaccgcctggttac
actacatggcaatttaattttaaatttaatctacaagaagatatgtatgcacaagactcc
attgatttgcttcagaattcaggattacaatttcgaaaacatgaagaggatggtattgaa
cctttagaatttgcagagctgttaatgtcatcaggtttagtactaatcgacaacattaaa
tggttaagttttcactcgggatatgattttggttacttacttaaattattaacagaccaa
aatttgccacaagatgaaaatgacttctttgacagcttgaggatgtacttcccaactgta
tatgatgtgaaatatttgatgaagttgtgcaagaatttaaaaggtggcctccaagaagta
gcagatcaactagagctgcggcgtgttggtccgcaacaccaagctgggtctgattcccat
ctcacaggaatggcattctttaaaatcaaagagatcttctttgatgacaacatagagagt
tcaagtggacatttatatggactgggtgctccattttctgtaaatgttaacaactttcaa
gataatggagaaaatgggaattcatcttga
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