KEGG   Manduca sexta (tobacco hornworm): 115455412
Entry
115455412         CDS       T07401                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115455412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msex03036]
    115455412
   03400 DNA repair and recombination proteins [BR:msex03400]
    115455412
Chromosome and associated proteins [BR:msex03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    115455412
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     115455412
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 115455412
NCBI-ProteinID: XP_037292527
LinkDB
Position
9:complement(7200297..7235931)
AA seq 266 aa
MIGTIEQFVDALVIHVLFSFCRRSAGRIMVEEDCISQFFHDNENLNSKSPLRFTGSPSKS
LDSSQDVSQQSIDDMLSLSHLTLEEYEPIHIQPFYNITPRAMPLSPHYILEEEFASNPWA
MLIATIFLNKTTGKLARPHMKRFFEEYPTPYHVLNERPTLLERFFDTLGLKKRGNMIWKL
SYQFVSSKWSRASDLYGIGKYGEDAYRIFCLGHTDLDPTDRYLKLYLDWLRSQTEFAEEN
GATDSEFIIEDPVLKYYRITLRNGEN
NT seq 801 nt   +upstreamnt  +downstreamnt
atgatcggaacaatagaacaatttgttgatgcgttagtcatccacgtattgttttctttc
tgccgccggagtgccggcaggataatggtggaggaagactgcatcagccagttcttccac
gacaatgaaaatttaaattcaaaaagccccctgcgctttactgggtcaccatcaaaaagt
ttagactcctcgcaggatgtaagccagcagtccatcgacgatatgttaagtctttcacat
ttgactttagaagaatacgaacctatacatatacagcctttctataatatcacaccaaga
gcaatgccgctgtcacctcactacatattagaagaagaattcgctagcaacccctgggcg
atgctaatagcaacaatattcttaaacaaaacaacaggaaagctggccagaccacatatg
aagagattttttgaagaatatcccaccccgtatcacgttttaaacgaaagaccaacgctc
ttggagcgatttttcgacactcttggtttaaagaaaagaggcaacatgatttggaagctc
agctatcaatttgtctcttctaagtggtctcgggctagtgacttatacggcataggaaaa
tacggcgaggatgcgtacagaattttttgtcttggccacacggatttagatccaacagat
agatacttaaagctttatttagattggctaagaagtcaaactgaattcgcagaggaaaat
ggagcgacagatagcgaatttattatcgaagatcctgttttgaagtattatcgaattacg
ctgagaaacggtgaaaattag

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