Manduca sexta (tobacco hornworm): 115455605
Help
Entry
115455605 CDS
T07401
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115455605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msex03032
]
115455605
03400 DNA repair and recombination proteins [BR:
msex03400
]
115455605
DNA replication proteins [BR:
msex03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
115455605
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
115455605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
115455605
NCBI-ProteinID:
XP_037300656
LinkDB
All DBs
Position
28:13745122..13761304
Genome browser
AA seq
1298 aa
AA seq
DB search
MSEDIKVTFIIPNDCESENECSEDMQLAFVTCEQHKGSGLHAKWVKESQWKKFEGLSKRD
VFVLSEFEGELCFKEAKEPVYPVAMRGLVVTASGLTKDKKEIIKIKVHWMGGTYNTVLTD
ETTHLISDTVLSVKYVRSVEIGIPVMSETWVDAVWEAALRLNVSGASLDFNNYRLPPFAN
LEVTTSGIPKRDKQMIMKLVNQHGGNFSGAFQSETTDVVVLTKEGVGSEKYKAALEYGKV
CVLPSWVKDSAEKGVALPVAKYKIVGASTSSPLAEHRLPDMSLNFSRITNLRPPSNFVDE
TRSADVSTTSGKIKLSQESRKANDTSIDKELQIELDSFDMNDIKKAGPIFDGFCIWLVNM
SGRAREVCAAAVSRCGGVRYDAPHARLTHALLASGAGGAGGAAAARDLPPSARLLSPLWL
LRSVKAGKPLDETPYLIHTTTSTPVKCARKQPAEASPMSKKNLQLLRREPLDLPPPTVEV
EPEDELVNHYLSQAAVENVPLDREKTPERVAPNSTTNEHPDITEDGEDPTEEIEQIFRGI
KFVVQGLDEEAIIEIGAEVSAAGGALCGAGAAAGAAGASHALVPLDFDPEELLTASAEPV
TVFWVKDCLSQQELVPIQYYHRPVRLASWSTAPLRGVVASLSTYSGIERAFLDELAKLLG
ATTQLRFCRRNTANALASTHLICPTPVGDKYTGALKWGLPAVKASWLMACAKEGKRVSER
GHLVGETKAPPSPAKLPEEAKAEGNPIVQPNESVDKENAMLPPQGSALPRRGSVPSAENT
PKNTPKAKLGNDGTDEMSPASRYIAMARQGLLGGDSQETPSRLHEVRDDDKIDSAAVRTP
PLEDALSTPNLQLLSPTTRRRLQALRRGDLPSDPIRTPRDPFDKNLPTPDSAFGAALRPG
SGRLSPDARKRLWRVVNELPSKQEQTPTNVNTPLSEIRNRFLAQFNGDAPSTPSDHHLAP
RKLHLLDQEDTPPAKMAKISQDQCAGGALNSSLAEDKRPAPAAGSPAVPPSLDAQLQRLN
AVLAGRLSSQKPRRSTRDSVSLAPPPAPESEPGPESQPNTVGWDDTSPARPLQPPQSQIK
KFMLSSNVDNREEIIEMIQYLGGEVCEGTELDPEMTHLLCAAPGRSEKMLGSIAAGRWVL
HPAYAARSRQANKFLAEEEYEWGNPLATCLPAVSGAERVLAAAAHRWRCRRAAGVGGGGG
PFTGVVALLHVPPPRRRLLARLVSAGDGLAPDDEPPYNNDRITVCFADVKRYPISARDAQ
WLKSRRIPVCAPVLLSSYLTDDPPPKPEEHCLPEFKLS
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatataaaagttacgtttattataccgaatgattgtgaaagtgagaatgaa
tgctcggaggacatgcaactggcttttgtcacatgtgagcagcataaaggcagtggtctt
catgccaaatgggtgaaggagtcccaatggaagaaattcgaaggactctctaagagggat
gtgtttgtcctgtctgagtttgaaggggaactttgtttcaaagaggctaaggaacctgtg
tacccggtggccatgagaggcttagtggtcaccgccagtggtttgactaaagacaagaag
gaaatcataaaaatcaaagtgcactggatgggtggaacatataacacagttttgacagat
gaaacaacacatttaatatctgatactgtgttatctgtgaagtatgtgagatcagtagaa
ataggcattccagtaatgtccgagacatgggtagacgcggtatgggaggcagcccttcgc
ctaaacgttagcggagcttctttggacttcaacaactaccgtctaccaccatttgctaac
ttggaggtgaccacgtcaggaatacctaagagagacaagcagatgataatgaagctagtc
aatcagcatggtggcaacttctcaggagcatttcagagtgagactaccgatgtggtggta
ttgacaaaagagggtgtaggcagcgaaaagtacaaagcggcattagagtacggcaaagtg
tgtgttttaccatcatgggtgaaagattcagcggaaaaaggagtcgctttaccagtagct
aaatacaaaatagtaggagcgtctacatcgtcaccgctggctgaacatcggctgcctgac
atgagtttaaatttctccagaatcacaaatctaagaccacctagtaacttcgtcgacgag
actagatcggcggatgtgtctaccacgtctgggaaaataaagctatcgcaagaatcacgt
aaggccaacgacacctctatcgacaaggagttgcagatagagctggacagtttcgacatg
aatgacatcaaaaaggctggacctatatttgacggattttgtatctggctagtgaacatg
tctggtcgggcgcgcgaggtgtgcgcggcggcggtgtcgcggtgcggcggcgtgcgctac
gacgcgccgcacgcgcgcctcacgcacgcgctgctggcgagcggcgcggggggcgcgggg
ggcgcggcggcagcgcgggacctaccgccgtctgcgcggctcctgtcgccgctgtggctg
ctgcggagcgtcaaggctggcaagccgttggatgagacgccgtacctcatacacaccacc
acgtcaacaccagtgaagtgcgcacgcaagcaaccggcagaagcgtctcctatgagcaaa
aagaacttgcagctccttcgccgggaaccgctggacctcccgccaccaaccgtggaggtg
gagcctgaagatgaacttgtcaaccattacttaagccaagccgcagtagaaaacgtaccg
ttagatagagagaaaacaccagaacgagttgctcctaattccactacaaacgaacatcca
gacatcacggaagatggtgaagatcctactgaagaaatagaacaaatatttagaggtata
aagttcgtagtgcaaggcctcgacgaggaggcgattatcgagatcggcgcggaggtgtcg
gcggcggggggcgcgctgtgcggggcgggggcggcggcgggggcggcgggggcctcgcac
gcgctcgtgccgctcgacttcgaccccgaggagctgctcactgccagtgctgagccagtc
actgtgttctgggtgaaagactgcctctcccaacaagaactggtgccgatccagtactac
caccgtccagtgcggttggccagctggagcaccgcgccgctgcgaggcgtggtggccagt
ctcagcacgtacagtggcatcgaacgagcattcttggacgagctggccaagctgctggga
gccacaacccagcttcgcttctgccgtcgcaacactgccaatgccttggcgtccacgcat
ctgatatgtcccacgcccgtgggagataagtatactggcgctttgaagtgggggctgcct
gcagtgaaggcgtcgtggttgatggcttgcgccaaggaggggaagagagtgagcgagaga
ggacatcttgttggcgaaactaaagcaccaccatcgccagcaaagctgccggaagaagct
aaagccgaaggaaatcctatcgtacagccaaatgagtctgtagacaaggagaacgctatg
ctgccgccgcagggatcggctttgccgcgccgtggctcagtgcccagcgccgaaaacaca
cctaagaatactcctaaagcaaaactggggaatgatggtacggatgagatgtctccagca
tcgagatatatagcgatggcccgacaggggttactcggcggagactcacaagagacgccc
agtagactacatgaagtgagggacgatgataaaatagatagcgcggcagtccgcacgcca
ccgctagaagatgctctctcgacgccgaacctgcaattactcagcccgactacccgccga
cgcctgcaggcgttgcggcgtggtgacctaccgtccgatcccatacgcacgcctcgtgat
ccattcgacaagaaccttcccactccagatagcgcgtttggcgccgcgctccggcccggc
tcgggcaggctgtcgcccgacgcgcggaaacgactgtggagggtcgtcaatgaattaccc
tcaaaacaagaacagactcccaccaatgttaatactccgctgtcggagatccgtaacaga
ttcctggcgcagttcaacggagacgcgccatcgactccttctgaccatcacctcgctccg
agaaaattgcatttgctggaccaagaggacacaccgccagccaaaatggcaaaaatttcg
caagatcagtgtgcaggtggagccctaaactcgagcctggcggaggacaagcggcccgcc
cccgcggccggctcgcccgcggtccccccgtcactggacgcacagctgcagcggctcaac
gcggtgctggcgggccggctcagctcgcagaagccgcgccgctccaccagggactccgtc
agcctcgcgccgccgcccgccccagaatccgagccgggcccggagtctcagcccaacaca
gtggggtgggatgatacatcgcccgcgcggccactgcaaccaccacagtcgcagatcaaa
aagttcatgctctcttccaatgtcgataatcgcgaagaaatcatcgaaatgatccagtac
ctaggcggggaggtgtgcgaaggtaccgagctggacccggagatgacgcatctactatgc
gcggcaccaggccgcagtgagaagatgctcggctccatagcggcaggccgctgggtgctg
caccccgcatacgcggccaggagtcggcaggcgaacaaatttttagcggaagaagaatac
gaatggggcaatcctctagccacgtgccttcccgcggtgtcgggagcggagcgcgtgctg
gccgcggcggcgcaccgctggcgctgcaggcgagctgctggtgttggtggcggtggcggc
cccttcacaggcgtggtggcgctgcttcacgtgccgccgccgcgccgtcgtctcctcgcg
agactcgtctctgcgggcgatggactcgctcccgatgatgaaccaccgtacaacaatgac
cgcataacagtgtgcttcgctgatgtcaaacggtatccaatctctgcacgcgacgcgcag
tggctgaaatcaagaaggatacctgtctgtgccccagtgcttctgagctcttacctgact
gacgatccaccgccgaaacccgaagaacactgcctacccgagtttaaactgtcttaa
DBGET
integrated database retrieval system
