Manduca sexta (tobacco hornworm): 115455624
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Entry
115455624 CDS
T07401
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msex03009
]
115455624
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115455624
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
Pre-60S particles
Helicases
115455624
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Peptidase_M50B
Motif
Other DBs
NCBI-GeneID:
115455624
NCBI-ProteinID:
XP_030040113
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Position
9:247187..253647
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AA seq
598 aa
AA seq
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MVNKDWAKITPALSKPVLSCINKQGFKTMTPIQAAVIPLILSCKDVVAEAVTGSGKTLAF
VVPLLEMLLKKQKDSPLRKDFVYAAIISPTRELATQIYTVIQQFLQEPELSHVTLALLVG
GRAVEIDVETLQKGAHITVCTPGRLEDLLSERKQLNLAGRMKELEILVLDEADRLLDLGF
SATLTTILQYLPRQRRTGLFSATQTKELQDLVRAGLRNPVVVSVKEKSTISTPLLLENYY
VIVESEDKFLFLLNFIRNRKIAKGLFFLPTCACVDYWADVLPVFLPGIKIFAIHGKMKLK
RSKILSKFREADNTILLCTDLLARGLDIPEVEWVLQWEPPTNPSALVHRVGRTARGGAAG
CSLLPLLPSEDTYVPFIKSNQMVELKDWRQSKDEIKISQKLREKVLSILHSQQKADRAIL
DKGQRAFVSHMRAYTKHECNLLLQFKDLPLGHIATSYGLLKLPLMPEIKQEHKDQFIGPK
EEIDFNSIPYKDKQKEASRLQKLEEYKKSGVWPSKKKKKNAQTQPWEQTKQNKEERKQKR
KKRKELKQKEGEGKRGKKRRVVTQEELDELAADVALLKKLKKRKITDEQFDKQFDVGD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggttaataaagactgggctaaaattacgccggcgttatcaaagccggtgttgagctgt
atcaataaacagggctttaagactatgacccctatccaagccgctgtaatacctctaatc
ctttcgtgcaaagacgtagtggctgaggcggtaacagggtcgggcaaaactcttgcgttc
gtcgttcctttgttggaaatgttgctgaagaagcaaaaggatagtccactgcggaaggat
ttcgtgtacgctgctattatatcgccgacgagagaattagcgacacagatttacacagtg
atccaacaattcctacaagagccagagctgtctcatgtaacactagccttgttggtgggt
ggcagagctgtggagatagatgtggagacactgcagaagggagcgcacataactgtgtgc
actccgggaaggcttgaggacctgctgtcggagaggaagcagctaaatttggctggacgg
atgaaagagcttgaaatcttggttctagacgaagccgaccgcctcctagatctgggcttc
agcgccaccctcacaacaatcttgcagtacttacccagacagcggcgcacaggcttgttt
tccgccactcagaccaaggagctccaggatctagtcagagctgggctgcggaacccggtg
gtggtcagcgtaaaggagaagtctaccatcagcacgccgttgctgctagagaactattac
gttatagtagagtcggaagataagttcctcttcctgctgaactttataaggaatcggaaa
attgctaaaggtctattcttcctgccgacatgcgcatgcgtcgactactgggcggacgtg
ctgcccgtgttcctgccaggcattaagatattcgccatccacggcaagatgaaactcaag
agaagtaagatcctgagcaagttccgcgaggctgataacactatactgctgtgcactgat
ttactcgctagaggcctagatataccagaagtagaatgggtgctgcaatgggagcctccc
accaatccctcggccctcgtccaccgagtaggtcgcacggcccgtggtggggctgcaggc
tgctcgctactcccgctgctgccttctgaagatacgtacgtgcctttcataaagagcaac
cagatggtggagctgaaggactggcgccagtccaaggatgagatcaaaatcagtcagaaa
ctgagggagaaggtgctgtcaatcctccacagccaacaaaaagcggacagagcgatacta
gacaaagggcagcgagcattcgtttcccacatgcgagcttacacgaaacacgagtgtaac
ctgctgttacagttcaaggatcttcctctaggacacatagcgaccagttacggactcctg
aaactgccgctaatgcctgaaatcaagcaggagcataaggaccagtttataggtccgaaa
gaggagatagacttcaatagtataccatataaggataagcagaaggaagcgagtcggttg
cagaagttggaagagtataagaagagtggcgtgtggccttcgaagaagaaaaagaaaaat
gcccaaacccaaccttgggagcaaacgaagcagaacaaagaagaacgaaagcagaaaagg
aagaaacggaaagaattaaagcaaaaggagggagaaggaaagagaggtaagaagagacgc
gtcgtcacgcaagaagaactcgacgagttagcggctgacgtcgcattgctcaagaaactg
aagaaacggaagattactgacgaacagtttgataagcagttcgatgttggggattaa
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