Manduca sexta (tobacco hornworm): 115455926
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Entry
115455926 CDS
T07401
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03018
RNA degradation
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115455926
09123 Folding, sorting and degradation
03018 RNA degradation
115455926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115455926
03041 Spliceosome [BR:
msex03041
]
115455926
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115455926
mRNA degradation factors
5'-3' decay
Lsm complex
115455926
Spliceosome [BR:
msex03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115455926
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
115455926
NCBI-ProteinID:
XP_030040594
LinkDB
All DBs
Position
5:complement(8081660..8083466)
Genome browser
AA seq
79 aa
AA seq
DB search
MSRKEALSSFIQQIHGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYG
DAFIRGNNVLYISTQKRRM
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtaaagaagctttatcatccttcatccaacaaatccacggccgcccggtagta
gtgaagttgaacagcggcgttgattacagaggtgtccttgcctgtctcgacggttatatg
aacatagctttagaacagaccgaagagtatgtgaatggacagctcaaaaacaaatatggt
gatgcttttataagaggcaacaatgttttatatattagcacgcaaaagagaagaatgtga
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