Manduca sexta (tobacco hornworm): 115455954
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Entry
115455954 CDS
T07401
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
115455954
03036 Chromosome and associated proteins [BR:
msex03036
]
115455954
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
115455954
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
115455954
SLIK complex
115455954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
115455954
NCBI-ProteinID:
XP_030040649
LinkDB
All DBs
Position
25:9871937..9885806
Genome browser
AA seq
1840 aa
AA seq
DB search
MRLKGSMHESESDSTSEKGEKTDSSGSGSGSESDSGSSSSASGSQRSGSDKSAEDRSHHS
DDTKSSPKHSNANSSKSDQHTDKNSSDDDSPSKSKSRSHSKVKSDLWEENPDIYGIRRSG
RSRKEPDRLKLADSDSSERGRTHRSKSRKKSDSWNSDTSESDSDLGGSPPPPSKRPGQRS
IPLRKKKPARRRRFTSEEDESSEGSDDETKSRTTTRRTGAAVSYKEASDEQTDSSDLLEV
EGVDGEAEAEPEPEDHSETIEKVLGIRRGKKGVTGNVTTIYYIEEHGDPNEGCDPNDDEL
SEPQYLIKWKGWSHIHNTWESEKSLLEQKVKGMKKLENYIKKEAELSWWRRQAGPEDIDY
YECQSELQQELVKTYNNVERIIAEQRRELESGGTAHEYFCKWESLPYSEATWEDSSLIEK
RWPVEVEHFKSREAAKCTPSRHCPVLRRRPKFHQVKEQPEYMGKDPSYVLRDYQMDGLNW
LIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLSTMTAWQREFQQ
WAPDINVVTYIGDLTSRDILRQFEWSFASSKRLKFNAILTTYEILLKDRQFLRSFSWACL
LVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIMPYKFESWEEF
EKDHEDAATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILT
KNYSALRKGVKGSINTFINIVIELKKCCNHALLTKPEDFESRASLATTDAVEKLLRGSGK
LLLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDH
FNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNI
YRLVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKREGSATTANNPFNKEDLNA
ILKFGAEELFKDDEENDEDPVCDIDEILQRAETRDEVPSMTGDELLSAFKVASFAFDEEK
AVMEVKKDNVEEESKDWDDIIPENVRKTIAEEEKIKEMEDIYLPPRRKNTQQNNADSRSG
RKRRGRSSGDGAEGGDGGDGDADDSDASDADHSDGDDRPRKRGRPPASHREKIKGFTDQE
IRKFVKSYKKFSAPLKHLDSIACDAELQEKPLAELKRLGEILQERCKAVLNETEAPSEQN
EGRKNNRKTFKLGGVPVNAKTLAACQNELAPLDDFLPDTKEERLKWQLDFRTRPANFDVE
WGVAEDSKLLAGIYQYGMGSWEAIKMDSSFEIGDKILTNEDKKPQAKHLQSRAEYLLKLI
KKLLDQKNGKQKQKKPRVRRGNKEPVTKDIVEDDMSSADDGKKGKIGKNDKGDKGKSRME
DLLTHDETSNDRKEKDKKRTKKEGKDRTKGEKLKGRKKPAGPMHFTANSEPRALEVLGDL
DPSVFEECKEKMRPVKKALRALDNPDQTLSEAEQVSRTRACLTQIGNQIDICLKAYPDGE
KKVEWRSNLWYFVSKFTNFDAKQLYRLYKYGLKKNEASKQKDGKHKENVRANNRNNHKTN
NHVPHKRNAKSTEATEKKEKRPKIEKEKSEKSNDKVPQSSGTKRKLEEGECDPEPNDNKR
HERHKLKHKDRNRKDGSLKQDDLMYRDRSRVERDRDRDRDRDRERDRERDRERDRDRDRE
RDRERDRERDRDRDRDRSRTRRDSGGVGPPRVRPPYAMPHAHAEHTPAHPAHPAHPAHAA
HAAHPAAWTPPAYPGPRQYRADRNSRQHDKRSRYGFSTMPGPYSAYYEGATSMASGMGFP
PVRPYPDEWRAYVQPEYGYEEREYEREVYRRDYDRRAPPT
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgaaaggttccatgcatgagtctgaaagtgattcgactagtgaaaagggggag
aagactgattcaagcggatctggatctggaagtgaaagtgatagcgggtcaagttcctct
gcatcaggctcccaacgatcaggttccgataagtctgcagaggatagatcacatcacagt
gacgatacaaaatcatcaccaaagcacagtaatgcaaattcctcgaaatctgatcagcat
acagataaaaattcttcagatgatgattctccttcaaaatcgaaatcacgaagtcatagt
aaggtgaagtcagacctatgggaggaaaacccagatatctatggcatcagaagatctgga
cgctcccgaaaagaaccagataggttaaaattggcagacagtgattccagtgagagaggc
agaactcacagaagtaaaagcagaaagaaaagtgattcatggaattcagacacatcagag
agtgatagtgatttaggaggttctccacctccaccatcaaagcgaccaggccaaagaagt
atacctcttaggaaaaagaaaccagctagaagaagaagattcactagtgaagaagatgaa
agttctgaaggttctgatgatgaaacaaaaagtcgaacaacaacaagacgtacaggtgct
gctgttagctataaagaagctagtgatgaacaaactgattcttctgatcttttggaggtg
gaaggtgtggatggcgaggcggaggctgaaccagaaccagaagatcacagtgaaactata
gaaaaagtacttggaattcgacgagggaagaaaggagtcactgggaatgtgactacaatt
tattacatagaagagcatggggatcctaatgaaggctgtgatcctaatgatgatgagttg
agtgaacctcagtacctgatcaaatggaaaggctggtcacatattcataatacctgggag
tctgaaaagtctctccttgaacaaaaagtcaaaggaatgaagaaattagaaaattacata
aaaaaagaagctgaactatcatggtggagaaggcaagctggtccagaagacattgattat
tatgaatgtcaatctgaattacaacaggaattagtaaaaacatacaacaatgtggaaaga
ataatagctgaacaaagacgagaattagaatctggtggaacagcacatgaatatttttgt
aagtgggaatctctgccatattctgaggcaacttgggaggattccagcttaatagagaaa
agatggccagtagaagtagagcattttaaaagtagagaagctgccaaatgtaccccctca
aggcactgtcctgttttaagaagaagaccaaagttccatcaggtgaaagaacaacctgaa
tacatgggaaaagatccgagttatgttttgagggactatcaaatggatggattaaactgg
ttgatacattcctggtgtaaagacaactcagtcattcttgccgacgaaatgggtttaggt
aaaactatacagactatttgctttttatattaccttttcaaatcacaacaactttatgga
ccattcctatgtgtggtgccattaagtacaatgactgcttggcaaagggaattccagcaa
tgggcgccagacattaatgttgtcacttatattggtgatctgaccagcagagatatttta
agacaatttgaatggagttttgctagttcgaaaagactgaaattcaatgctattctaacc
acatatgagattttattaaaagatagacaatttttgaggtcattcagctgggcttgcttg
ctggttgatgaggctcatagattaaaaaatgatgattcattgttatacaaagctttaaaa
gaatttgatacaaatcacagattacttgttactggtactccattacaaaattcattgaag
gagttgtgggctcttttacattttataatgccttacaaatttgaatcttgggaggaattt
gaaaaagatcatgaggatgcagcaacaaaaggttacgaaaagttgcacaaacagctagaa
cccttcattttaagaaggcagaaaaaagatgttgaaaaatctttgcctgccaaggtggaa
caaatcttaagggtagaaatgacgtcgattcagaaacaatattacaagtggattcttacg
aagaactacagcgctctgcgtaagggcgtcaagggttccatcaatacgtttattaatatt
gtgatagaattaaagaaatgttgtaatcatgcattattgacgaaacctgaagatttcgaa
tcgcgagcgtcgcttgccactacagatgccgttgagaaattactgagaggttcagggaaa
ttgctcttattagacaaactgctgtgcaggttaaaagaaacaggacatagggtccttata
ttttctcaaatggtgaggatgttggacattttggcggagtacttgcaaaggaggcatttc
ccctttcaacggcttgatggcagtataaagggagaattgaggaaacaggctcttgatcac
ttcaatgctgaaggttcgcaggacttctgttttctgttgtccactcgcgctggtggtttg
ggtataaatctcgctactgccgatactgtgataattttcgattctgattggaacccccaa
aatgacttgcaagctcaagcgcgtgcacatcgtattggacagaaaaatcaggtcaacatt
tataggttagttaccgctagatctgtagaagaggatattgttgagagggcgaaacggaag
atggttctggatcaccttgtcatccagcggatggacaccactggtagaacagttctcaat
aagcgcgaaggctccgcaaccaccgcgaataatcctttcaacaaggaagacctgaacgcc
atattgaaatttggagctgaggagttgttcaaagatgatgaagaaaatgatgaggatcct
gtctgtgatattgatgaaattttgcaaagagctgagacgcgggatgaggtgccttctatg
acgggagatgaactactctcggcatttaaagtcgccagttttgcttttgacgaagagaaa
gctgttatggaggtcaaaaaagataatgtcgaagaagagagcaaagattgggatgacatt
attcctgaaaatgtgagaaaaacgatagcagaagaagaaaaaatcaaagagatggaagac
atatacttgccgccgcgacgaaagaacacgcagcagaacaatgctgacagcagaagcggt
cgcaagcggcgtggtcgcagctctggcgacggcgcggagggcggcgacggcggcgacggc
gacgcggacgacagcgacgccagcgacgccgaccacagcgacggcgacgaccgccctcgc
aagcgcggccgcccgcccgcctcgcatcgggagaagatcaagggcttcaccgaccaggag
attcgtaaattcgttaagagttataagaaattttcggcacctctcaaacatctggacagt
atagcgtgtgatgcagaacttcaagaaaagcctctcgctgagctgaaaaggttaggcgag
atcttgcaagagaggtgtaaggctgtgctgaatgaaacagaagcaccaagtgagcaaaac
gagggtcgcaaaaataacaggaaaacatttaaacttggtggtgtccctgtgaatgctaag
acattagcggcgtgtcaaaatgagctggcgcctttggatgattttctacctgatacaaaa
gaagagaggctaaaatggcaattagattttaggacgaggccagcgaattttgatgtggaa
tggggcgttgcagaagattcaaagctgctcgctggcatttatcagtatggtatgggatca
tgggaggctataaaaatggactcttcctttgaaataggtgataagatcctaaccaacgag
gataagaagcctcaagcaaagcatttacaatctagggcagaatatttgctaaaacttata
aaaaaattacttgatcagaaaaatggtaaacaaaaacagaaaaaaccccgcgttagacga
ggtaataaagaaccagtcactaaagacattgtcgaagacgacatgagttctgcagatgac
ggcaaaaaaggaaagattggcaaaaacgacaaaggggacaaaggaaaatcgaggatggaa
gatttattaacacatgatgaaacttctaatgatcggaaagaaaaagacaaaaaacgaacg
aagaaggagggcaaagatcggactaaaggtgaaaagttgaaaggacggaagaagccggcg
ggtcccatgcatttcacagccaatagcgagccccgggcgcttgaggttttgggcgacctc
gatccttccgtttttgaagagtgtaaagagaaaatgaggcctgttaagaaggctcttcgg
gctctcgataatcctgatcaaactttatcagaagcggaacaagtttctagaacgagggcg
tgtcttacccaaattggaaatcaaatagacatttgtctgaaggcctatccagatggtgag
aaaaaagtggaatggaggagtaatctctggtattttgtgtcgaagtttactaactttgat
gcgaaacagttgtacaggttgtacaagtatggactaaagaaaaatgaagcatcaaaacaa
aaggacggaaaacacaaggaaaatgttagggcaaacaacaggaataatcacaagacaaat
aaccatgtgccacacaaaagaaatgctaaatcaactgaagcaacagaaaaaaaagaaaag
agaccaaaaatagaaaaagaaaagtctgaaaaatctaatgataaagttccacagtcttca
ggaacaaaaagaaagctggaagaaggtgaatgtgatccagagccaaatgataataaacgc
cacgaaagacataaactcaagcacaaggatcgcaaccgtaaagacggaagtttgaagcaa
gacgatttgatgtacagagaccggagccgagttgaacgagatcgtgatcgcgatcgcgat
cgtgaccgggaacgggatcgagagcgagatcgtgagcgagatcgagaccgagaccgagag
cgagaccgggaacgtgatcgagaaagagatcgcgaccgggaccgcgatcggtcgcggaca
cggcgcgacagtggcggtgtggggccgccgcgcgtgcgcccgccttacgccatgccgcat
gcgcacgccgagcacacgcccgcgcaccccgcgcacccggcgcaccccgcgcacgccgcg
catgcagcgcatcccgccgcctggacgccgcccgcctatcccggcccgcgacagtaccgc
gccgaccggaattcgaggcaacacgataagagaagcaggtacggttttagcacaatgcct
ggcccgtacagtgcatactacgagggcgccacgtcgatggcgagcggcatgggattcccg
ccggtgcggccttacccggacgagtggcgtgcctacgtgcaacctgagtacgggtacgag
gagagagaatacgagcgcgaagtgtacaggagagattacgaccgtcgcgctccacccact
tag
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integrated database retrieval system
