Manduca sexta (tobacco hornworm): 115456196
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Entry
115456196 CDS
T07401
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03018
RNA degradation
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115456196
09123 Folding, sorting and degradation
03018 RNA degradation
115456196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115456196
03041 Spliceosome [BR:
msex03041
]
115456196
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115456196
mRNA degradation factors
5'-3' decay
Lsm complex
115456196
Spliceosome [BR:
msex03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115456196
Complex C
U2 snRNP components
115456196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
115456196
NCBI-ProteinID:
XP_030041017
LinkDB
All DBs
Position
28:16968017..16968471
Genome browser
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLSDISVIDPDKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEATVSTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttattctactcatttttcaaatctttaattggaaaagacgtggttgtggagctcaaa
aatgacctgagcatatgcgggacgttacactctgtggatcaatacttgaacataaaacta
tctgatataagcgtcatcgatccggacaaatatcctcatatgctgtcggtaaagaattgt
tttatccgagggtctgtggttcgttacgtgcagctgccggcagacgaagtcgacactcaa
ctcctgcaagatgctgcacggaaagaagctaccgtttctacaagataa
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