Manduca sexta (tobacco hornworm): 115456209
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Entry
115456209 CDS
T07401
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115456209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115456209
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
115456209
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
UTP6_C
Motif
Other DBs
NCBI-GeneID:
115456209
NCBI-ProteinID:
XP_030041031
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Position
28:complement(16957665..16966679)
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AA seq
727 aa
AA seq
DB search
MSTAEENPEIDWGNERLTRAQRAVESNIYDVDSWSLLIREAQTRNINEVRTMYERLITAF
PTTGRYWKIYIEQEMKARNFEKVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPTYKEK
MAQAYDFALDKIGLDIHAYPIWNDYVTFLKSVDAVGSYAENQKISAVRKVYQRAVITPII
GIETLWKDYIAFEQSINTIIAERMAMERSREYMNARRVAKELETVTRGLNRNMPATPPTV
DREEMKQVELWKKYITWERSNPLRSEDTALVARRVMFAIEQCLLCLAHHPDVWHQAAQFL
DHSAKLLQEKGDSNAARLFSDEAAAVYERATSGPLKHSTLLHFAHADYEESRLHYNKVHQ
VYTRYLDMEDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDTRSRYHVFVAAALMEYY
CSKDKNIAFRIFELGLKKFSHIPEYVLCYIDYLSHLNEDNNTRVLFERVLSSGSLKPESS
VDIWNRFLEFESNIGDLVSIVKVEKRRQAVLEKIKEFEGKETAQLVDRYKFLDLYPCSIA
ELKSIGYTEVASMSNKSWALGGPLAGISPELAAVILGQKDNDPNKDIARPDISQMIPYKP
KMNPLPGEHPIPGGTFPMPPAAAHLCTLMPPPSCYRGPFVAVDRLMQLFNRISLPDKPPA
PTQENGCDTKLFDLARSVHWIVDDEGITTVASKARRRKAGDDSDDDELGVAPPVNDIYRQ
RQQKRVK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgccgaagaaaacccggaaattgactggggaaacgagagactaacccgcgcc
caaagagcggtagagtccaacatttatgatgtggactcctggtcgctgctcatcagagag
gcacagacgcgtaacatcaacgaagttaggacgatgtacgagaggctcatcacagccttc
cctaccactggacggtattggaaaatttacattgagcaggagatgaaagcacgcaatttt
gaaaaagtggaaaagctgttccagcgttgcctgatgaagatactcaacatagaactctgg
aggctgtacctcaactacgtaaaagaaaccaagtgcatgctgcctacctacaaagaaaag
atggctcaagcttacgatttcgctctggacaaaatagggctggacattcacgcttacccg
atttggaacgattatgtcacatttctgaagagtgtggacgcggtcgggtcatacgcagaa
aatcaaaagatatcggctgttagaaaggtatatcagagagctgtgatcacgcctattata
ggaattgagactctatggaaggactacattgcgtttgaacaaagtatcaatactattata
gcggaacgtatggcgatggaacgctcccgcgagtacatgaacgctcgtcgcgtcgccaag
gagttggagacggtcacccgagggctgaacaggaacatgccggccacaccgcccaccgta
gatcgtgaggagatgaagcaggtagaactatggaagaagtacataacctgggagcgatcg
aacccactccgttcggaagacacggcgctggtggcgcggcgcgtcatgttcgccatagaa
cagtgcttgctgtgtctcgcgcaccatcctgacgtgtggcaccaggcggcacagtttctc
gaccattcggccaaactgctgcaggagaaaggggattcgaacgcagcgcgtctattctct
gatgaggcggcggccgtgtacgagagagccacgagtggtccgctcaaacactccactttg
ttgcatttcgcgcatgctgactatgaagagagcagacttcattacaataaggtacatcag
gtgtacaccagataccttgatatggaggacatagatccgaccctggcctacgtacaatac
atgaaattcgcgagacgtgccgagggcatcaaatcagctaggacggtgtttaaacgtgcc
agggaggataccaggtcgcgataccacgtgttcgtggcagcagcgttgatggaatactac
tgttccaaagacaagaacatcgcattcaggatcttcgagcttggactgaagaagttttct
cacataccggaatacgttctgtgctatattgactatttatcgcatcttaacgaggacaac
aacacccgagtgctgttcgagcgtgttctctcttcaggcagcttgaagccggagagctct
gtggatatatggaacaggtttctggagtttgagtccaatattggtgacttggtcagtatt
gtgaaggtcgagaagcggaggcaggctgtgctcgaaaagattaaagagttcgagggtaaa
gagacggcgcaactggtcgacaggtacaagttcttggacctttacccgtgtagtatagcc
gaattgaagtccattggatatacagaggtggcgtcaatgtcgaacaaatcgtgggctctc
ggcggtccactagcaggaatatcacctgaactggctgcagtcatattgggacaaaaagac
aatgaccccaataaggacatagcccgaccagacatcagtcagatgataccttataagccg
aaaatgaacccactacccggcgaacaccctatacctggcggtacattcccgatgccccct
gcggctgcgcacctctgcacgctcatgccgcctccgtcgtgctacaggggcccgttcgtg
gcggtcgacaggctaatgcagctgttcaacaggatctcattgcctgacaaaccgccagcg
ccaacgcaagagaacgggtgtgacacgaagctgttcgacttagcacgatcagtacattgg
atagttgatgacgagggcatcaccacagtagccagcaaggcccgcagaaggaaagcggga
gacgattccgacgacgacgagcttggggtggcgcctccagtcaacgatatttaccgccaa
aggcagcagaaacgcgtcaagtaa
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