KEGG   Manduca sexta (tobacco hornworm): 119188493
Entry
119188493         CDS       T07401                                 
Name
(RefSeq) LOW QUALITY PROTEIN: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119188493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msex03021]
    119188493
   03036 Chromosome and associated proteins [BR:msex03036]
    119188493
Transcription machinery [BR:msex03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119188493
   Coactivators
    SAGA/TFTC/STAGA complex
     119188493
Chromosome and associated proteins [BR:msex03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     119188493
    STAGA complex
     119188493
    TFTC complex
     119188493
    SAGA complex
     119188493
    SLIK complex
     119188493
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SPT8 NBCH_WD40 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_IFT122_1st TFIID_NTD2 Ge1_WD40 GDPD WD40_like
Other DBs
NCBI-GeneID: 119188493
NCBI-ProteinID: XP_037301314
LinkDB
Position
Unknown
AA seq 459 aa
FKHLLFFRSCKYDIYLSQDALNLLKAYLAKHGHVLLIQVLQTWFHIDINNDTNKKNSEDE
EEMEEEVNVTRNDFDDRAMDANDVFAKCNGHAEYQSVDKELRDLQDAIKGVRESMAPLKL
YKISAPDTQLVCAKTDPNCNILCGGFSNSEVRLWDLGQNNVKRRVNRNISEFELACYMQP
EPSPDDNTLQIGAGLPLRGHSGPVQDVCVLPREELILSASYDNTMRAWRLSDYSCAALYR
GHNYPIWCMDVSKSGLFVVTGSNDRTAKLWSLNRTFPVRVFVGHLSDVTCVKFHPNEVYI
ATGGADRSVRLWSVCDARLMRVLCGHRGVVRTLAFAPSGSYLASAGDDKKIKVWDLAACT
CVHEYRGHHGKVTALDWSAIGKSSLTNRMVPDPSDLPTENSLLCSAGMDGIVKVVCDSYS
KNKQMSNQEVLSSTYNTKCTYLVDVQVHPEWVVAIGTKR
NT seq 1380 nt   +upstreamnt  +downstreamnt
tttaagcatttgctatttttcagatcttgcaaatatgacatatacttatcacaggatgca
cttaatttattaaaagcatatctggctaaacatggacatgtgctactaatacaagtttta
cagacttggtttcatattgacataaacaatgacactaacaagaagaattcagaagatgaa
gaggaaatggaagaagaagtgaatgttactagaaatgattttgatgatagagcaatggat
gcaaatgatgtatttgcaaaatgcaatggacatgcagaatatcaaagtgttgacaaagaa
ctgagagatctgcaagatgcaataaaaggagtgagggaatcaatggcacctcttaaactg
tacaaaatatctgcacctgatactcaattagtatgtgcaaaaacagatcccaactgcaac
atattgtgtggaggatttagcaattcagaggtaagattatgggatcttggacaaaacaat
gtcaaaaggagagtcaatcgcaatatatcagaatttgaactagcatgttacatgcaaccg
gaaccctcaccagatgacaacactttacaaattggtgctggcttgccattaagaggtcat
tcaggtcctgttcaagatgtttgtgtgcttcctcgagaagaactgattttatcagcctca
tatgacaatacaatgagagcctggaggctttctgattattcatgcgctgcactgtataga
ggtcacaactatcctatttggtgcatggacgtgtcgaaaagtggactttttgttgtaacc
ggttctaatgatcgaactgctaagctttggtcgttgaatagaacatttcccgtaagagta
tttgttggacatttatcggatgtaacgtgtgtgaagttccatccaaatgaggtgtacatt
gctacaggtggagctgatcgaagtgtacgtttatggagtgtttgtgatgcacgtttgatg
cgtgttctttgtggtcacagaggtgtagtgagaacacttgcttttgctccttcaggatca
tacttagccagtgctggtgatgataaaaaaattaaagtttgggacttggctgcttgcaca
tgtgtgcatgaatatcgaggacatcatggcaaagtgactgcacttgactggtcagcaata
ggaaaatctagcttaacaaacagaatggtgccagatccaagtgacctacctacagaaaac
tcgctactatgttctgcaggcatggatggcattgttaaagtagtttgcgacagctattca
aaaaataagcaaatgtctaatcaagaagtcttatcctccacatacaacaccaaatgcaca
tatttagttgatgtgcaggttcatcctgagtgggtggttgccattgggaccaaaagataa

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