Manduca sexta (tobacco hornworm): 119188817
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Entry
119188817 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119188817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msex03400
]
119188817
Enzymes [BR:
msex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
119188817
DNA repair and recombination proteins [BR:
msex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119188817
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
YeeD
HHH_5
HHH_2
Motif
Other DBs
NCBI-GeneID:
119188817
NCBI-ProteinID:
XP_037292698
LinkDB
All DBs
Position
9:4774988..4778982
Genome browser
AA seq
333 aa
AA seq
DB search
MSWNKLLCNHRELQLLGTLSGGQSFRWIHNKENDEWTGIFSKTVWKLKQENDYLLYQVIG
SLLTTTQTIIKNKKQKNTANRIFESLLEQYFRLDFNLSKYYEQWSEKDGLFKSACEQFYG
IRMLSQEPVEKLFSFICSQNNHISRISSMVEKLCSQYGDEICKHDGVTYYAFPEVEQLAQ
PEVQWNQSXRKLGFGYRAKFIQKSATQIVEWGGNEWFKSLQDMKYKDAKQELMKLHGIGP
KVADCICLMSLNHLEALPVDTHVYQIAAQNYLPHLRGKKNVTEKMYAEIGDHFRNLYGDM
AGWAHTVLFCADLKKFQKSDESNSVVPKKKRKK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaataaattattatgcaatcatcgcgagcttcagctgctcggtactttgtct
ggtggacaaagttttaggtggatacataataaagaaaatgatgaatggactggaatattt
tcgaaaacagtgtggaaattaaaacaggagaatgattatttactataccaagtcatcggt
tcgttattgaccacaacacagaccataattaaaaataaaaaacaaaaaaacacagccaac
aggatctttgaaagtttattagaacaatattttagacttgattttaatctcagtaaatac
tatgaacaatggtcagagaaagatggacttttcaagtcagcatgtgaacaattttatggg
atcagaatgctctcccaagagccagtagaaaagctattttcgtttatatgtagtcaaaat
aatcacatttcaaggatatcgagtatggttgagaaactatgctcgcagtatggagatgag
atttgtaaacatgacggggtgacatactacgcattccctgaagttgaacaattggctcaa
ccagaggtacagtggaaccaaagttaacggaagctaggttttgggtacagagccaagttt
atacaaaagtcagcaacacaaattgtagaatggggtggtaatgaatggtttaagagcttg
caagatatgaaatacaaagatgctaaacaggaattgatgaagttacatgggattggacct
aaggtagctgactgcatctgtctaatgtccctcaaccacctcgaagctttaccagtagac
acccatgtctatcaaatagcagctcaaaattatctgccccatttacgaggaaagaagaat
gtcactgaaaaaatgtatgctgaaattggggatcatttcagaaatttatatggagatatg
gctggatgggctcacacggtattattttgcgcggatctaaagaagtttcaaaaatcagat
gaatctaatagtgttgtgccaaaaaagaaaaggaaaaaatga
DBGET
integrated database retrieval system
