Manduca sexta (tobacco hornworm): 119189174
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Entry
119189174 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 10-like
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msex04121
]
119189174
Ubiquitin system [BR:
msex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119189174
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF12
WD40_like
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
119189174
NCBI-ProteinID:
XP_037294095
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Position
13:complement(12016119..12029650)
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AA seq
637 aa
AA seq
DB search
MGNRDVFMARYSAFSPYRLREREMGFPTPIGAEDAMAKSLYCGMKPIASWDFDRSKTVPT
GGVFNLEFSPDGTMLVAACEKKSIQIFDPLTHQKIQSVNDAHSDCVNCVKFLDARMFATC
SDDTTIALWDVRNLKKKIRTLLGHSKWVKNIEFSVKDKLLVTSGLDGSIYTWDINSYTEY
NLVYQKVFHTSSLMRCRLSPDARQMVMCTTGGLLIIIHDLNLSTLAQDLHGFKPNLYRLM
QMSQQMIPIAAMYDHLFDSSRKENRVEFVADFPEDNDAEVVSALQIHPQGWSALSRNISH
DDRSEWTCIHDIQPLESERGVARDSCRAPPRCAPSPAPAHAPASPPRRARPTCLPARARL
RPLARTHSRSQLLDGISPASRSRAESEPEPEPGPSSAASSVPAEEQLAAPAPAPAAPPAA
RLVASMSSIQNDVWEASITVKQNRMLQEFYSRGQLRRNFNMQRITGINTGITPPAALRPR
LTGFGFAVDPGESSMLAPSTSGHTSRDITTEDGPAPRRYADRFIRQNKERLLYYIEETNE
GKGFIKELCYSADGRLVCSPFGRGMRLLALNEDCSELPHCVQDLNRPRLMVDVGQSLGIH
QDLVVSSRFSPRYHMLVTGCLEGKIVWYQPYSGEALY
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacagagatgtgtttatggcgaggtattccgcattcagcccctaccggctgagg
gaaagggagatgggcttcccgacccctataggcgctgaagatgccatggcgaagagctta
tattgtggcatgaagcccatagcatcttgggatttcgaccgaagcaagactgtgcccact
ggaggcgtgttcaaccttgagttctcgccggacgggacaatgttggtggcagcttgtgag
aagaaatcaatacagatatttgatcctctgactcatcagaagattcaatctgtcaatgat
gcacattcagattgtgttaattgtgttaaattcctggacgcccgaatgttcgcgacatgc
tcggacgacacaacaatagcgttgtgggatgtgcgcaacttaaagaagaaaatacgcaca
ctgcttggccactccaaatgggtgaagaacattgagttctcagtaaaagacaaattgctg
gtgacttccggattggacggcagcatatacacgtgggacataaactcgtataccgaatac
aatctggtgtatcagaaggtgtttcacacgtcgagcctgatgaggtgcaggctgtcaccc
gacgcgcggcaaatggtgatgtgtaccaccggcggcttgctcatcatcattcacgacctg
aacctgtccacgttagctcaagatttacacggatttaagccaaatctatacaggctgatg
caaatgagtcaacaaatgataccaatagcagctatgtacgaccatctgtttgatagcagt
aggaaggagaatcgagtggaatttgtcgctgacttccccgaggacaatgacgctgaggtg
gtcagcgcgctccagattcacccacaaggatggagcgctttgagtaggaatattagtcat
gatgataggtccgagtggacgtgcatacacgacatccagccgctggagtcggagcgcggc
gtggcgcgcgactcgtgccgcgctccgccgcgctgcgccccgtcccccgcgcctgcgcac
gcgcccgcgtctccgccgcgccgcgcgcgccccacctgcctgccagcgcgtgcgcgcctc
cgcccgctagcgcgcacgcactcgcgctcgcagctactcgacgggatatcaccggcgtcc
cgctcgcgagccgagtcggagcccgagccggagccgggcccgagctcggcggcgtcgtcg
gtgccggcggaggaacaactcgccgcgcccgcccccgcgcccgccgcaccgcccgccgca
cgactcgtcgcgagcatgtctagtattcagaacgacgtgtgggaagcttccatcacggtc
aagcagaatagaatgctccaagaattttacagcagggggcaattgcggcggaacttcaac
atgcagcggataacgggcatcaacacgggcatcacgccgcccgccgcgctgcgcccgcgc
ctcacaggattcggcttcgccgtcgaccccggggagagtagcatgttggcgccgtccaca
tcgggccacacgtctcgcgacatcaccaccgaagacggtcccgcgcccaggcgatacgcg
gataggttcataaggcagaataaagaaagactgctctactacatagaggagaccaacgag
ggcaaagggtttatcaaagaactctgctattcagcggacggtcggctagtgtgttcgcct
ttcggccgcggtatgcgactcttggcattaaacgaagactgcagcgaactgccacactgc
gtccaggatctcaacaggccacggctgatggtggacgtggggcaaagcctcggcattcac
caagacctggtggttagctcaaggttcagcccccgctaccacatgctggtgacaggctgc
ttagagggcaagatagtgtggtaccaaccgtacagcggcgaggctctttactag
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