Manduca sexta (tobacco hornworm): 119189994
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Entry
119189994 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119189994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
119189994
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119189994
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Rep1
Motif
Other DBs
NCBI-GeneID:
119189994
NCBI-ProteinID:
XP_037296834
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Position
21:3740920..3744470
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AA seq
559 aa
AA seq
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MVTKNDIFSHRLIISVLWNIAMQILLAIVLVWLIQIDLVHPMTWISSTISYIFSWKMFFN
IILLGLVSFFQAYIYGSYYMTPMPKYFTRFSMFMNIFSLQNFILSILYALSGYFTMSLYS
SLSKTDILKKKCVTYDGQCLVESGLFIQFGGMWMGLYYLMNVHVFNVSTLVFSHMYQGKF
QQMKLAINNILSLGFKNSIPPVIYYCLFYYVWGNKPRSAVSEVYNSYLEDPPLDNIFNLF
RSGIWISLWLYTSLFLISMYIMKSTFNFILTEPMNFPIESNTHMTIYDALSQRYQFCEYL
GAQDLKIMSLSDPARRLQIFTLSQPGGHPKNWNNLLDQCLHIINDFSRQLDTLNHNEQQE
IEVSNRITXLNARPHSDRSYDGIRNMAHSPELLHLKNHNKTPAEDSFAVIMEDECKNILN
RICQMPGISFFFGELTDTKLKYLLVQAQPVVWVCEGLAFMAAASLKEDKYGVVQNDLAKV
ITALINLKQNLEKLTKPGLMSRKHVLNDAYAIKMRAALFSSVKRSIYKLVITFSKYMHEI
PLDRDVQLAIQPYLLLKEA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggttacgaaaaatgatatattttcccacagattgattatttcagtattatggaacatt
gctatgcaaattctacttgctattgtgttagtttggctaattcaaatcgacttggtacat
ccgatgacatggatatcttctacaatcagctacatttttagttggaaaatgttctttaac
ataatactcctgggattggtttcatttttccaagcttatatatacgggagttactacatg
acaccaatgcctaaatatttcaccagattttctatgttcatgaatatattttcactgcag
aattttatattgagcattctgtatgccctgagcggttattttactatgagcctatattca
tctctgtctaaaaccgatatattgaagaaaaaatgtgtaacatatgacgggcagtgcctt
gtcgagtcaggcttgttcattcagtttggtgggatgtggatggggttgtactacttaatg
aatgtccacgtatttaatgtgagtacgctggtgttctctcacatgtaccagggtaaattc
caacagatgaaactggccataaacaatatactctctctaggattcaagaactccatacca
cctgttatatattactgcttgttctactatgtttggggaaataagccaagaagcgctgtc
tcagaagtgtacaattcatatctggaagatcctcctcttgataacatattcaatttattc
agatctggaatctggatttccttgtggttgtacaccagtctatttctcatttcgatgtac
atcatgaaaagcacatttaactttatacttacagaacctatgaatttccccattgagtct
aacacccatatgacaatatatgatgcattgtcccagagatatcaattttgcgaatattta
ggggcacaggatttgaaaataatgtcactgagtgatcctgcacggagattgcaaatattc
acactgtcgcaaccaggtggacatcccaagaactggaataatttattggaccagtgtttg
cacattattaatgatttcagtcgtcaattggatacccttaaccacaatgaacaacaagaa
attgaggtatctaatcgaataacanttttaaatgcaagacctcattctgacagatcctat
gatggtataagaaatatggcccattcaccagagttgcttcatcttaaaaatcataataaa
accccagctgaagattcatttgctgttattatggaagatgagtgtaaaaatatacttaat
aggatatgccaaatgccaggcataagctttttctttggtgagcttactgatacaaagttg
aaatatctccttgtacaagcccagcctgtagtatgggtatgtgaaggtttggcctttatg
gcagcagcctctttaaaagaagataaatatggtgttgtacaaaacgacttggcaaaagtg
attaccgccttaattaatctcaaacaaaatttagaaaaattaacaaaaccaggtttgatg
tccaggaaacatgtgcttaatgatgcatatgctataaaaatgagggcagcactgttttct
tctgtcaaaaggagtatatataaattagtaatcacattttcgaagtatatgcatgaaatt
ccattagaccgagatgttcaacttgccatacagccatatctgttattaaaagaagcttaa
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