Manduca sexta (tobacco hornworm): 119190031
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Entry
119190031 CDS
T07401
Name
(RefSeq) probable ATP-dependent RNA helicase DDX28
KO
K20096
ATP-dependent RNA helicase DDX28 [EC:
5.6.2.7
]
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msex03009
]
119190031
Enzymes [BR:
msex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119190031
Ribosome biogenesis [BR:
msex03009
]
Eukaryotic type
Other ribosome biogenesis factors
119190031
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
119190031
NCBI-ProteinID:
XP_037296916
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All DBs
Position
21:complement(6451568..6454744)
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AA seq
474 aa
AA seq
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MSKVRQIINTSYCRYYSIQRAKKKLPIITCKRPEFNHYEGQTYSKFEGIKLASQGWNHPK
SKQDYFIIHGNANKSIEPSIYRKSYDEIGLNPKLIQIMLESGFTLPTAIQAKAIPSILNG
NNTVITAETGCGKTLAYLLPIFQHILEWKPSVKEDFNSPLAVIITPSRELATQIGEVAEN
LAQTLNLNVTTLIGGKTKQKMINPPIEYCDVLVTTLGAYSKLVTTGIYKIQNVHHMVLDE
ADTLLDDSFINKVSNLLKKFSIQYKVDIQVPPVGCQLTLVSATMPHELPETVNSFVAPES
LKTVTTSNIHRLLPHIPHKFIRLGKAQKPSELLKIVQADVNLKRPVMIFSNKTATCDFVS
MFLNENNVECININGQMAVALKIGKFEQFKSGKVNVLSCTDIAARGLDTIRTQHVINYDF
PLYTADYIHRCGRTGRIGSPEDCSVTNFVAWPREIQMVQKIESVCEEEWGVAKC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtacgtcaaattataaacacatcctactgcagatattacagtattcagaga
gccaagaagaaattgccaatcataacctgcaaaaggccggaatttaaccactacgagggt
caaacttacagcaaatttgagggaataaagctagcttcgcagggctggaaccatccaaaa
tcaaagcaagattactttataatccacggcaatgcaaataaaagtatagaaccgtctatt
tataggaagagttacgatgaaattggattaaatccgaaactaatacagattatgttggaa
tctggctttactttaccgacagctatacaggcaaaggcaataccgtcaatattgaatggc
aataataccgtaatcacagcagaaactggatgtggtaaaacgcttgcgtatcttctgccg
atttttcaacatattttggagtggaaaccgagtgtgaaagaggatttcaacagcccgctt
gcggttattataacgcctagtagagagttagcaacccaaattggtgaagtagccgaaaac
ctagcacagactctgaatttaaatgtgacaaccctaattggtggtaaaaccaaacagaag
atgatcaaccctccgatagagtactgcgatgtgcttgtgacaaccctgggagcgtacagc
aagcttgtcacaactggcatatacaagatacaaaatgttcatcacatggtacttgatgag
gctgatacactgttggacgatagttttatcaataaagtgtcaaatctgttgaagaagttt
tctatacaatacaaagtagatattcaagtgcctccagtaggatgtcagcttacactggtc
agtgccacgatgcctcatgaattaccagaaacagttaactcttttgtagcccctgagtct
ttgaagactgtcaccacatccaatatacacagattattgcctcatataccacataagttc
atccgtctaggtaaagctcagaaaccgtcagaactgctcaagatagttcaagcagatgtc
aatttgaaacgtccagtgatgatattcagtaacaagacagccacatgtgactttgtgtcg
atgtttttgaatgagaataatgttgaatgtatcaatattaatggacagatggctgtggca
ttgaagattggaaaatttgaacagttcaagagtgggaaagtcaatgttctgtcttgcact
gatatagctgctagaggattagatactataaggacacaacatgtaataaactacgacttt
ccactatacacggcagactacatacatagatgtggtagaactgggcgcatcggatctcct
gaagactgttctgttactaacttcgttgcttggccgcgtgaaatccaaatggtgcagaaa
atagagagcgtctgtgaggaagaatggggagttgccaagtgttaa
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