Manduca sexta (tobacco hornworm): 119190155
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Entry
119190155 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msex03037
]
119190155
Cilium and associated proteins [BR:
msex03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
119190155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_19
TPR_11
TPR_7
TPR_16
TPR_6
TPR_14
RMD1-3
ANAPC3
TPR_10
RNPP_C
ARM_TT21_4th
ARM_TT21
RPN7
Iml2-TPR_39
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
119190155
NCBI-ProteinID:
XP_037297273
LinkDB
All DBs
Position
22:complement(9520122..9529749)
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AA seq
784 aa
AA seq
DB search
MLSSRYYSASRLGTDAKPRTAMVLDEDEDLYSGFNDVAPALDTRNLREDEVFQETLRTAG
IGRKVPSRMGTGMTRIGTVGMRDXSGSARGSVTALRAAGYTSAQRDPPARNCGNENSIED
RVKQMEARIMALVEESCMLSARHDPDDQTSAKKENDLGQALSKAQEASALERQLIRMQEQ
ANLGDSHNLDLTFAVLCNLAGQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGNIYF
KMGEHPKALKLYRMALDQTPTAEKDLRMKVMHNIGLLLVRMGKFRDAITNFQHIMHEQGD
FQTGLHLVLCSVALNDAEGGKAAFHAMLDVEPPTYHQDITIDDESDAYECVVRDVVRGDR
LSRWSRRAAADAERCLARAAAALTKPDARDDESGGMSWCVEALRGYSGGGAGARLELGGA
LAGLRAFRTGTGAATGAGTRALQRLKAVARAHPDDRVLRAEANADAAFVAYALGSYSEAR
ALADAASRDDPYSCPARVTAALAAAIAPAPSPAGLASAPATPVALTWRDTASQLTAATHL
DPADLIAMHDLALALERSGEESACEAAEARWSRVRSAGGAGATLRALAAAGLARLARRGD
VAAADHWYSSIGTWDAGVTCALAQLHSEMGDTMTAKHHYQDVEAIWPCELSALEWLASES
PPDVALQHYRRAARLQPNNPQWGLLIGSCLRASGRYQEALALYKKMNTRFPDNVQCLKLI
VKLCGDQGLSETNAWSRELQRAQARIKQLERVSVTSAGSGSSGASQSPVDQIRGNIVMYL
YNKF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgttgagttcgcgttactacagcgcttctcgactgggcaccgacgcgaagcctcgcacg
gctatggtgttagacgaagacgaggatctgtactcgggctttaacgatgtggcgcccgcc
ctggacacgcgcaacctgcgggaagacgaggtgttccaggaaactcttaggacggccggg
ataggcagaaaagtgcccagccgtatgggcaccgggatgacgcggataggcacagtgggc
atgcgtgacngaagcggctcggcacgcggctccgtgactgcgctccgcgccgccggctac
acctccgcacagcgcgacccgcccgccaggaactgcgggaacgagaacagtatcgaagac
cgagtaaagcaaatggaggcccgcatcatggcgttagtggaggaatcgtgcatgctgagc
gcaagacacgatcccgatgaccaaaccagcgctaaaaaagaaaatgatttggggcaggcg
ttatctaaagctcaggaagcctcagcccttgaaagacaactaattcggatgcaagaacag
gcaaatcttggtgactcgcataacttagatttaactttcgctgttctttgcaacctggcc
ggtcagtacgctctcaacgaaatgtatacggaagcgctgaacacgtaccagttattaact
agaaataagctatttccacatgccaatcgtttaaaagtaaatatgggcaacatatatttc
aaaatgggtgagcatcctaaggctttgaaattgtatcgtatggcgttggaccaaacgccg
acagcggaaaaagatttgaggatgaaagttatgcataatattggtttactgctagtaaga
atgggcaaattccgagatgcaataactaattttcaacacatcatgcacgaacaaggagat
tttcagacaggtcttcatttggttttgtgctccgtagcgcttaacgacgctgagggcggc
aaagccgcttttcacgctatgttagacgtcgaaccacctacttaccatcaggacattaca
atcgatgacgagagcgacgcgtacgagtgcgtggtgcgcgacgtggtgcgcggcgaccgc
ctgtcgcgctggtcgcgccgcgccgccgccgacgccgagcgctgcctcgcgcgcgccgcc
gccgcgctcaccaagcccgacgcgagggacgacgagtcagggggtatgtcgtggtgtgtg
gaagctctccgcggatatagcggtggcggcgcgggcgcgaggctagagctgggcggcgcg
ctcgcgggcttgcgggcgttccgcacgggcacgggcgcggccaccggggcgggcacgcgc
gcgctacagcggctcaaggctgtggcgcgcgcgcatcccgacgaccgggtattacgcgcc
gaggctaatgctgacgctgcctttgtggcttatgctttaggcagctattctgaggcgcgt
gcactggcggacgcagcctcccgcgacgatccatactcgtgtccggcgcgcgtgacggcg
gcgctggccgccgcgatcgcccccgcgccctcccccgccggcctcgcctccgcgccggcg
acacctgtcgcgctcacgtggcgcgataccgcttcgcaactcaccgccgctacacatttg
gaccctgctgatctcatcgctatgcatgacttggcgctagccctggagcgcagcggcgag
gaaagcgcgtgcgaagcggcggaggcgcgatggtcgcgcgtgcgcagtgcgggcggcgcg
ggcgccacgctgcgcgccctggccgcggccggcctggcgcgcctggcgcggcgcggagac
gtcgccgccgccgaccactggtatagttctatcggcacatgggacgcgggcgtgacatgt
gcattggctcagctccacagcgagatgggagacaccatgaccgccaaacaccactatcaa
gacgtagaagctatttggccgtgcgagttgtctgcgcttgaatggttggccagcgagtcc
ccgccagatgtcgctctacaacattaccgtcgagctgcacggctacagcctaacaatcct
caatggggtctccttatcggcagctgcctgcgagccagcggccgttatcaagaggcgctc
gcgttgtacaagaagatgaacacacgatttccggacaatgtccaatgcttgaaattgata
gtgaagctttgcggagaccaaggtctgtcggagacgaacgcttggagccgggagctgcag
cgcgcccaggctaggattaagcaactggaaagagtttcggtaacatcagctggcagcggt
tcgtcaggtgcgagccaatctccggtggaccaaattagaggtaatattgttatgtaccta
tataataagttttga
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