KEGG   Manduca sexta (tobacco hornworm): 119192782
Entry
119192782         CDS       T07401                                 
Name
(RefSeq) LOW QUALITY PROTEIN: CDK-activating kinase assembly factor MAT1-like
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03022  Basal transcription factors
msex03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119192782
  09124 Replication and repair
   03420 Nucleotide excision repair
    119192782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msex03021]
    119192782
   03400 DNA repair and recombination proteins [BR:msex03400]
    119192782
Transcription machinery [BR:msex03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     119192782
DNA repair and recombination proteins [BR:msex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     119192782
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4 zf-UDP zf-C3HC4_2 TRAF3_RING zf-RING_4 Use1 ALMT zf-RING_16
Other DBs
NCBI-GeneID: 119192782
NCBI-ProteinID: XP_037302444
LinkDB
Position
Unknown
AA seq 309 aa
MDDQACPRCKTTKYRNPSLKLMVNVCGHVLCESCVDLLFLKGSGTCPDCNILLRRGNFRV
QLFEDPMVEKEVDIRKRVLRDYNKKEEDFATLRDYNDYLEEIETIVYNLTNNIDVVETNK
RIEQYKKENKELIMKNKAKIGREAVQLEEVLEKEKELEELRRQELSRLEQEAKKQKIRXK
EALIDELMFADGDAKDILNTFAQNMANKQEELASAVPLVTQFSSGVQFTRGASNQPIPII
EEGPLYKYEPLAVPDRCGPDAPSIANIVNCGYLKHVRAENECEKAGGYSATLPCLRALQD
ALAGLYHAS
NT seq 930 nt   +upstreamnt  +downstreamnt
atggatgaccaagcgtgtccgcgttgtaaaacaacgaaatatcgcaatccctcgcttaaa
ttgatggtaaatgtgtgtggtcatgtgttatgtgaaagttgtgtagatttattattcttg
aaaggttccggaacatgtccagactgtaacattctcctcagaagaggcaatttcagggtc
caactcttcgaagaccccatggttgagaaagaagttgatattaggaagagagttttgcgg
gattataataaaaaagaagaagattttgcaacactccgggactataatgattatttagaa
gaaattgagactattgtgtacaacttaacaaataatatagatgttgtagagactaacaaa
aggatagaacagtataaaaaagaaaacaaagagcttattatgaagaataaggcaaaaata
ggtagagaagctgtacaattagaagaggtattagagaaagagaaagaattagaggaacta
cgcaggcaggagctatcacggttagaacaagaggccaagaaacaaaagatacggnagaaa
gaagcgctcattgatgagctgatgtttgcagatggagatgccaaagacatactgaatacg
tttgcgcaaaacatggctaataaacaggaggaattggcgtctgctgttccattggtaaca
caattctcttctggtgtgcaatttacccgtggggcaagtaaccagccaattcccataata
gaagaaggtccattgtataaatatgaaccactggctgtaccagaccgttgtggtccagac
gctccgtccatagccaatatagtcaactgtggatatttaaaacacgttagagcggagaac
gagtgtgagaaggcgggcggctacagcgccacgctgccgtgcctgcgcgcgctgcaggac
gcgctcgccggactctaccacgccagctga

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