Manduca sexta (tobacco hornworm): 119193431
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Entry
119193431 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msex03021
]
119193431
Transcription machinery [BR:
msex03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
119193431
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
BACK_BPM_SPOP
Motif
Other DBs
NCBI-GeneID:
119193431
NCBI-ProteinID:
XP_037302929
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
GSLVAGALAAAARGRRARAPARPRPGLRAALRRPPPPSPGHHAAQGQHQTTGAVPTTLHT
PAPTPDPHAPPTPAPPSLPPPKLYNQGESPGWSGWSGWGGEPPEAARRPVLPRAPRRPDP
LEDETALRMLYDYTTVYAWLEHPVKRFKSEENCFREELALGVAAGEDLYAGHDHTSMAVM
LDHAKVEIKQERQDHTEDTKEYKNLFTSDGLCATFKDLDQIFDNSDDAASGDETVRLMQV
ACGEESRWAGRCVRAEELSKMFPTPPSMEAHAQPSPGFSLPDDVPPPRHLPPAGSPPPDA
AIEDWSFVFKPPTVYKYVGSSKYAPLTTLPSQLLPPVTLPPQAVYRPRCHREQGKRDADT
DTDSHRNGVKRSASPASESRRRGRGGAGLAGAAPGRVARADAEPERRGRARPSAAPAAPR
PAHSACPLLLNVLLADTVLNVFRDHNFDSCTLCVCNAGPRVVGNIRGGDASTYLSPLPVE
GGGEEGEGGGVDDEPARCTCGFSAVVNRRLAHRAGLFYEDEMEITGVAEEPGGAGGGGGG
GLSDVAGVVVAQCAALAGGNASALARAAARSAQRAAHDDLRLNLLEYSDGGSAAARALRA
ARTGSLGGATPTPAPAPANSSAVHRWPFISARAPRSSRDVVRLMRRLRPLLQDAIQKRCC
GARMWDGVTGPLTWRQFHRLAGRGNEDLCEPQPVPPLLVGHDRDWVSLSPYALRHWERLA
LEPYSYARDVAFVVVGADCDALQDPLRMFFRELSTAYEACRLGRHRPVGRIARDGIVRAP
ASGGSATRDEWAGDLPXGRLGEYVRAYAEALRNVVPQLAALPVDRTLFEGTGGSSPARAE
GSASPTPEHEPEPASAPQSSAALCDADESGPPALVLYLVEPPAAPADRARALHCLLRLAA
TTHTHLMHHNPLIKIVSLESVCEVWGMGGTEECAVAGGVRALAFSVFSGARRLLAHHANG
KSLTGFGTAAHANLFLHSKDEKNRAAYKLFSPAWVLAAPRALKEVAETWGQGAGEGAVLF
VSYCLSHDQRWLLAAATDARGELLDTAAINIHVPHRSRRRRNGPARRMGLTKLMDFTLGV
MSQAAQPWRLVVGRVGRIGHGELKGWSWLLSRKHLDRASNMLREICGSCSVLYPTHVPCI
LSACLVSTEPDSCLRLMADRFTPDERFSQASIQSHLHTPRDVTATHILVFPTSATTQSNQ
MPFEPPMANGXDNDMMFLNVDMGDEDMADDNINDLLIGDMFNNMWAPNSPRRADDELAAP
LRLRTIPRTITRRTRDSRSRSVGTVLQQPLALGYLVSTAPLGAMPGWWWAGCGHLRDACP
AFLKNALHLHSVHAADDFTSLTQRRDHNTHPLDSQTTTDVLRYVLEGYNALSWLALDGNT
HDRLSCLPLHVQVLMQLYHTAAALG
NT seq
4219 nt
NT seq
+upstream
nt +downstream
nt
agggtcgctggtggcgggcgcgctggcggcggcggcgcggggtcgccgggctcgtgcgcc
ggctcgcccgcgcccgggcctccgcgccgccctccgccggccgccgccgccctcgcccgg
acaccacgccgcgcagggacagcaccagaccacgggcgcggtgccgacgacgctgcacac
gccggcgcccacgcctgacccgcatgcaccgccaactccggcgccgccatccttgccgcc
gcccaagctgtacaaccagggcgagtccccgggctggtcgggctggtcggggtggggcgg
cgagccccccgaggcggcgcgccggcccgtgctgccgcgcgcgccgcgccgccccgaccc
gctcgaggacgagaccgcgctgcgcatgctctacgactacaccaccgtctacgcatggtt
ggaacaccctgtgaaacgtttcaaaagcgaggagaactgctttcgcgaggagctggcgct
aggcgtggctgccggcgaggatctgtacgcgggccacgaccacaccagcatggcggtcat
gctcgaccacgccaaggtcgagatcaagcaggagcggcaagaccatacggaggacacaaa
agagtacaagaatctgttcacatcggacgggctgtgcgcgacgttcaaggacctcgacca
gatattcgacaactcggacgacgcggccagcggtgatgagacggtaagacttatgcaggt
ggcgtgcggcgaggagtctcgctgggcgggccggtgcgtccgcgcggaggaactcagcaa
gatgttccccacgccgcccagcatggaggcgcacgcgcagccctcgcccggcttcagcct
gcccgacgacgtgccgccgccgcgacacctgccgcccgccggctccccaccaccggacgc
cgccatcgaggactggtcgttcgtattcaaaccaccgactgtgtacaagtacgtgggctc
gtcgaagtacgcgccgctgacgacgttgccgagtcagctgctgccgccggtgacgctgcc
gccgcaggccgtgtaccggccgcgctgccaccgcgagcagggcaagcgcgacgcagacac
cgacaccgactcgcatcggaacggtgtgaaacggtccgcgtctcccgcgagcgagtcccg
gaggcgcgggcgcggcggcgcggggctcgccggcgccgcgccgggccgcgtcgcccgcgc
cgacgccgagcccgagcgccgtggccgtgcccgcccctccgccgcacccgccgcgccccg
ccccgcgcactccgcctgcccgcttctgctcaacgtgctgctggccgacaccgtgctcaa
cgtcttccgcgatcacaacttcgacagctgcacgctctgcgtctgcaacgccggacccag
ggtggtgggcaacatccgcggcggcgacgcttccacgtacctgagccctctgccagtgga
gggcggcggtgaggagggtgaaggtggcggcgtggacgacgagcccgcgcgctgcacttg
cggcttcagcgccgtcgtcaaccgacgcctcgcccatcgcgccggacttttctatgagga
tgaaatggagataactggcgtggcggaggagccgggaggggcgggcggcggcggcggcgg
cgggctgagcgacgtggcgggcgtggtggtggcgcagtgcgcggcgctggcgggcggcaa
cgcgtccgcgctcgcccgcgccgccgcgcgctccgcacaacgcgccgcgcacgacgacct
gcgactcaacctgctcgaatactctgacggcggcagtgcggcggcgcgtgcgctgcgtgc
ggcgcgcacggggtcgctgggcggcgccacgcctacgcctgcacccgcgcccgccaacag
cagcgccgtacatcgctggccttttatcagcgcccgcgcgccgcgctcttccagggacgt
cgtcagattaatgcgtcgactccggccgctactccaggacgcgatacaaaaacggtgctg
cggcgcgcgaatgtgggacggtgtcaccggcccgctcacctggcggcagttccaccgact
ggccggccgcggcaatgaggacctgtgcgagccgcagccagtgccgccactgcttgtcgg
acacgaccgcgactgggtctcactgtctccgtacgcgctgcgtcattgggaacggctcgc
gttagaaccatactcgtacgcgcgtgatgtcgccttcgtcgtggtcggcgccgactgcga
cgcactccaagatccactacgcatgttcttccgtgaactctctaccgcgtacgaagcctg
ccggctcggacgtcacaggcctgtgggtcgcatcgcaagagacggcattgttcgagctcc
tgcctcaggtggttcggcaacaagggacgaatgggctggcgacctgcccnncggacggct
cggcgagtatgtgcgggcgtacgcggaggcgttgcgcaatgtggtgcctcagctggcggc
gttgccggtagaccggacgctgttcgagggcacgggcgggtcgtcccccgcgcgggcgga
gggctcggcgtcgcccacgccggagcacgagccggagccggcgtcggcgccgcagtcgag
cgcggcgctgtgcgatgcggacgaaagcgggccgccggcgttggtgctgtacctggtgga
gccgcccgccgcgcccgcggaccgcgcgcgtgctctgcactgcctgctgcggctcgccgc
caccacacacacgcatctgatgcaccacaatccactcatcaagatcgtgtcgctggagag
cgtgtgcgaggtgtggggcatgggcggcaccgaggagtgcgcggtggcgggcggggtgcg
cgcgctggcgttcagtgtgttcagcggcgcgcggcgactgctggcgcaccacgccaacgg
caagtcgctcaccggcttcggcaccgccgcgcacgccaacctcttcctgcactccaagga
cgagaagaaccgcgcggcgtacaagctgttctcgccggcgtgggtgctggcggcgcctcg
cgcgctgaaggaggtggcggagacgtgggggcagggcgccggcgagggcgccgtgctgtt
cgtgtcctactgcctgtcgcacgaccagcgctggctgctggccgccgccaccgacgcccg
cggcgagctgctcgacacggccgccatcaacatacacgtgccgcaccgctcgcgccggag
acgcaacgggcccgcgcgccgcatgggcctcaccaagctcatggacttcacgctcggcgt
catgagccaggccgcgcagccctggcgcctcgtcgtcggacgcgtcggacggatcggaca
cggcgaactcaagggctggagctggctactgtcgcgcaaacacctagaccgcgcgtcgaa
catgctgcgcgagatttgcggcagctgctcggtgctgtacccgacgcacgtcccatgcat
cctgtctgcgtgcctggtctccactgagccggactcgtgtctgcgactcatggctgatcg
gtttacgcccgatgagcggttctcacaggcgtccatacagtcgcacctgcacacgccgcg
tgatgtgacggccacgcatatactcgtcttcccgacctcagccaccacgcagtcaaacca
gatgccattcgagccgccgatggcgaacggcngagacaacgacatgatgttcctgaacgt
ggacatgggcgacgaggacatggccgatgacaacatcaacgacttgctaatcggtgatat
gttcaataacatgtgggcgccgaactcgccgcggcgtgccgacgacgagctggcggctcc
cctgcgcctgcgcaccatcccgcgcaccatcaccaggcgcacgagggacagcaggagcag
gtcagtgggcacagtactccaacaaccgctggcgctcgggtacctggtgtcgacggcgcc
gctgggcgcgatgccgggctggtggtgggcgggctgcggccacctgcgcgacgcgtgtcc
cgccttcctcaagaacgcgctgcatctccactccgtgcacgccgccgacgacttcacctc
gctcacgcagcgccgcgaccacaacacgcacccgctcgactcgcagaccaccaccgatgt
cctcagatatgtgctggaggggtacaacgcgttgtcatggctcgccttagacgggaacac
gcacgatcggctctcctgcctgccgctgcacgtgcaggtcctcatgcagctgtaccacac
ggcggcggcgctgggctaa
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