Microbacterium schleiferi: IT882_02615
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Entry
IT882_02615 CDS
T07058
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
msf
Microbacterium schleiferi
Pathway
msf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IT882_02615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5979
Motif
Other DBs
NCBI-ProteinID:
QPE05031
UniProt:
A0A7S8RI54
LinkDB
All DBs
Position
534393..542357
Genome browser
AA seq
2654 aa
AA seq
DB search
MTQRSHGTGNTRRSRRSPWRRLVHRIRPLTAVALSTLLVVSGAVAVGTMPAYADDINATL
AITKSTDDPITPTGVVSPGETFEYDLLFSCGTSVGSVSGCKNATITDLLPEWIEFVSVSS
FPVSAPGTSTVTDVGGRDQVTLAFTSPVNTPGATTGLPLGTFQMTIQVKLADDAPWEIDG
TTIINTADITADNAVPQSDSAPIEAAVPVNLATTTDKSFDPSSNYNMAGETTRLTLSGTN
TTNGGVDTLTVQDPAGATPLPADDTSPFHYLEFTDFGAMTLPAGAEQVTAEVYSIADSAW
HTVYVGAGPPVYPAAGPGIPDKTDIYGIRFTYADTGGGRIDVSATGSAEVALTQRAAVES
LSVATTVDNTVQSTVSLGSDTVSSPVVTKPYQIIPFGLQVSASKTFSPDQIKAGESTTVN
IGAVNSGTATLAELVISEPGAGTPGSLSGDLTFAGFGTVSGGAGNGIQWPSGATEATIVY
HYDDNTSSAPLSTSVSGTIPDSPSALRVVGFDITFTGAPIVSGAEAKTPFVVSTQRVGTP
PDLTTVPNDVDAVAKAFTDITLTDSDTATDELEIYGDRMAVEVSKSIQPSQSWLVPGQQT
VAQIPAVISSFPATTVNPTQVIVDDAAVLSPDWWNIYNATELPSLGIPSNATLTVQYTTD
GSSWTNLPGAVGLSSPPAYQTVTIDPALSDTIIGLRFVYDAVSGESFDPGSTFQPNITFT
TREQTRNAPIVDIEDVPTTGTIPDPSTPSGTIDVVQVANCATADASVASPAMSAATANTS
PCPISTLIPINGGSGVGPDLVDKDVTPVTVVERSQAGTNGTLGWSTGGLTGVTQMRVTET
GSTSYAPATSANLDSSFLNAFDVIRLAPITKTTDPLIAYDQLVSVELFDYTAAGGAGAWV
PISGAPWDGPTSGTIVFPGYTLTDAEQATTTGVRYTFAESPNRASALTPGNLTQPAVGSG
VAASTDRRPITVNFQLRDDRRSDGSPVLFGEAYNTAGDLSVVTNTVNAQACLVAFVADAC
ADGYSTNDSDTVTILNGTANITTTKSWSTGVSGGGALGIPPTGTPAADYPTTRMTLSVVN
NGPQKVDTLDLTDPAPNVAFEGTAWDVFTLTNIVSITPPKDSDGSGGNADVAVYLDLAGG
GELGPLTISAATALTPGQLDDVVGVRAYASGRISYTSSGNNNGRLQIQLDAQLRETLRSD
PMTRVSAGSVDNTIFGSIGDPSVETSGSCAVSNPPVTADPNTVVSCNNASISLSDTQDRT
VLAGKSFSPTNEYENTNDRIRMLLSGQPGGNARSNQLVLTDTTPGFWNAYGFAGLVNANP
SQFAIASPANRVQIELLTGATYTVEVDNSITVSGGTWNAVVNGSGDQWMTATQARSALAP
GAATATASILGGGTVTYGEVQGIRFTYQRVASGSIADPSAPLLLFENPANPTLTGNLFVQ
RRDALLTGGDVPTTLSGNTASPGTTSAGVFPNTVVADATGIPGNGSPATDDADANFTFRH
LPTAATVVKTPTGQVAPGTNFEVALTTTNNGGYPILNPVITDNLPVGTVAAGLPDYVFPD
GIDPTDPANYTFALSSGSAPGAPWTELPIDPADVNVVVTSSSGVDPEPVAIRFEFPADSA
LGLGQVYRISWDMRLRSGAVANQPFTNEYEITGDRDFDSCNGVAGTTDICSTTATVTTQP
LATFGMFQQVRALDPALGVISSTAATCTMADADPDGFFVDPCAPVTKPGQNNEWRLNYEN
WGSYPLDEISTIIYLPNAGQSGIDIPTVDSLWRPVLASATGPGLRADDTPTAARTVYYST
ESPGTSLCDDVLTDGGTCPPGYWQPLDASVDLTTVTALYVVVDFAGGGDLLQPGEKFQLA
FETTAPPAAFNPGNDPITWNSAKTGGKYTTGGSQRTLPPFEVPVVGASLASGSLQLTKTV
DGDASGAGWVPTSFDGTLSCTSAGVAVPTAAIPTVPTLTDGTTVTVGGLPWGAECTFVET
DAGSDVTLSPSTVTVSNDPTAIEVQSVTNTYDYASLLVEKTVEVPTPPGTTYPVPTDFAF
TAVCTFNGATVLNETFLLDDGDTRLFEDLPARSECVVTETDPRDADSTVTSVTVIDPTVP
PTIDQPARQATIPELSPDSAGGDTQNTVSYVNSYDLVALTITKDLEGEGAAQFGANQTFT
VDVVCTFAGETLVDTSVELSAGNAWTASLTGLIAGSDCVITEPDLEGADAVVITPNDGSD
TTTGEITLPDTGTATVTVTNWYLTGSLEVTKVFDGAAATQYGTADFDLELVCLRDGVDVD
IPGGNDRTVNATAPTASWTHLPTGADCTLAETGIGGAGATAILDAGGSVLVDPATDGYTF
TVVTDPTILNVADQPQPSLQVRNTFTYAEVSVSKVVETEALDNNGDPIPFGPFEVTLQCT
WESATVTANEPMTQTIGDGDSFTWTGLPEGADCVIEETDTVNAASTTYEITQGGATAPAV
DGIEASLAPLPAEGAADQTSVLFTNEYPVAPMIIRKEVDGTGAADVTRSFPVNVRCVLID
ASHPDPGILVRDVNVEIGGPSNLQPEIDFLPLGSSCTITETDTGGASSVSITGTPYMGLP
GAGGVPGASTTVTDSSITVTLSDNHYLVEITNTFIKPLPPTGGIFAWTVPIGAALMTVIG
LMFVLWRRFEPGRD
NT seq
7965 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcgttcacacgggactggcaacacacggcgctcgcgtcgatccccgtggcgg
cggcttgtgcaccgcatccgccccctcactgccgtcgcactctcgacgctgctcgtcgtc
tctggcgcggtggccgtcggcacgatgcccgcgtacgcggacgacatcaatgcgacgctc
gcgatcaccaagtcaaccgatgacccgatcacccccaccggcgtcgtctctcccggcgag
accttcgaatacgaccttctcttcagctgcggcacgtccgtcggcagcgtcagcggctgt
aagaacgccacgatcaccgacctcctccccgaatggatcgagttcgtcagcgtcagctcg
ttccccgtgtcggcgccgggcacctcgaccgtcaccgacgtcggaggccgcgaccaggtc
accctcgcattcacctcccccgtgaacaccccgggtgcgaccaccggcctcccgctcggc
accttccagatgaccatccaggtcaagctcgccgacgacgcaccgtgggagatcgacggc
accacgatcatcaacaccgccgatatcaccgctgacaacgccgtgccccagagcgacagc
gcacccatcgaggcggcggtgcccgtcaacctcgccacgacgaccgacaagtcgttcgac
ccgagcagcaactacaacatggccggtgagacgacccggctcacgctctcgggcaccaac
accaccaacggcggcgtcgacaccctgaccgtgcaggaccccgccggtgccaccccgctc
ccggccgacgacaccagccccttccactacctcgagttcaccgacttcggcgccatgacc
ctccccgccggggctgagcaggtcaccgccgaggtctattcgatcgccgacagcgcgtgg
cacaccgtctatgtcggcgccggcccgcccgtctaccccgccgcaggcccgggtatccct
gacaagaccgacatctacggcatccgattcacctacgccgacacgggcggcggcaggatc
gacgtttccgccaccggctccgcggaggtcgcgctgacccagcgcgccgcggtcgagagc
ctctcggtcgccacgacggtcgacaacacggttcagagcacggtgagcctcggcagcgac
accgtctcgtcccccgtcgtcaccaagccgtaccagatcatcccgttcggcctgcaggtt
tcggcctccaagaccttcagccccgaccagatcaaggctggcgaatccacgaccgtcaac
atcggcgccgtcaacagcgggacggcgacgctggcagaactggtcatcagcgagcccggc
gccggtacccccggatcgctctccggcgatctcaccttcgcagggttcggcaccgtctcc
ggcggcgccggcaacggcatccagtggccctcgggcgcaaccgaagccacgatcgtctac
cactacgacgacaacacctcgtcggctccgctgtcgacctccgtcagcggcaccatcccc
gactcgccgtccgcgctgcgggtcgtcggattcgacatcaccttcacgggcgccccgatc
gtttcgggcgccgaggccaagaccccgttcgtcgtgtcgacgcaacgtgtcggcaccccg
cccgacctgacgaccgtccccaacgacgtcgacgccgtcgcgaaggccttcaccgacatc
accctcactgactccgacaccgccaccgacgagctggagatctacggcgaccggatggct
gtcgaggtcagcaagagcatccagcccagccagagctggctcgtgcccggacagcagacc
gtcgcccagatccccgctgtgatctcctccttcccagccacgaccgtcaacccgacgcag
gtcatcgtcgacgacgccgccgtgctgagcccggactggtggaacatctacaacgccacc
gaactgccttctctcggcatcccgagcaacgcgaccctcaccgtgcaatacacgaccgac
ggcagcagctggacaaacctccccggcgcggtcgggctcagctcgcccccggcgtaccag
accgtgacgatcgacccggcgctgtcggacacgatcatcggcctgcgcttcgtctacgac
gcggtctccggcgagtccttcgacccgggctcgaccttccagcccaacatcaccttcacg
acgcgtgagcagacccgaaacgccccgatcgtcgatatcgaggatgtcccgaccaccggg
acgatccccgacccgtccacccccagcggcacgatcgacgtcgtccaggtggccaactgc
gcgaccgccgacgcctcggtagcctcgcccgccatgtcggcggccacggcgaacacctcg
ccgtgcccgatctcgacccttatcccgatcaacggcggcagcggggtcggccccgacctc
gtcgacaaggacgtcacgcccgtcactgtcgtggagcgctcgcaggccggcacgaacggc
accctcggctggtcgaccggtggcctcaccggcgtgacccagatgcgcgtcaccgagacc
ggatcgacctcctacgctcccgccaccagcgcgaacctcgacagctcgttcctcaacgcc
ttcgacgtgatccggttggcgccgatcacgaagaccacggatccgctgatcgcctacgac
cagctggtctcggtcgagctgtttgactacaccgccgccggcggcgcgggagcctgggta
ccgatttccggcgccccgtgggacggaccgacctcgggcaccatcgtgttccccggctac
accctgaccgacgccgagcaggccaccacaaccggtgtgcgctacacgttcgctgagagc
ccgaaccgcgcatccgcgctcacacccggcaacctcacccagcccgcggtgggcagcggc
gtcgcggcatccaccgaccgccgacccatcacggtcaacttccagctgcgcgatgaccga
cgctccgacggcagccccgtgctctttggcgaggcctacaacaccgccggcgacctgagc
gttgtgaccaacaccgtgaacgcacaggcctgcctcgtcgccttcgtcgcggatgcctgc
gccgacggttactcgaccaacgacagcgacaccgtcacgatcctcaacggcaccgcgaac
atcacgaccaccaagtcctggtcgaccggtgtctcgggcggcggcgccctcggaatcccg
ccgacgggcacccccgcggctgactacccgacgacccgcatgaccctcagcgtcgtgaac
aacggcccgcagaaggtcgacaccctcgacctcacggacccggcgcccaatgtcgctttc
gagggcacggcgtgggatgtgttcacgctcaccaacatcgtgagcatcaccccgcccaag
gactccgatggctccggaggcaacgccgacgtcgcggtctatctcgacctcgcgggcggc
ggcgagctcggcccgctcacgatctcggccgctaccgcgctgaccccgggccagcttgat
gacgtggtcggcgtgcgcgcctatgcgagcggacgcatctcgtacacgtcctcggggaac
aacaatggacgcctccagatccagctcgatgcgcagcttcgggagaccctgcgcagcgac
cccatgacgcgggtgagcgccggctcggtagacaacacgattttcggatccatcggcgac
ccctcggtcgaaacctccggatcgtgcgcggtctcgaacccgcccgtgaccgccgacccc
aacacggtcgtctcgtgcaacaacgcgagtatttcgctcagcgacacgcaggatcgcacc
gttctggcaggcaagagcttctcgcccaccaacgagtacgagaacaccaatgaccgcatc
cggatgctgctgtcgggccagcccggcggcaacgcccgcagcaaccagctcgtgctcacc
gacacgaccccggggttctggaacgcctacggcttcgccggactcgtaaacgccaacccg
agccagttcgcgatcgccagccccgccaaccgggtgcagatcgagctgctcaccggcgcg
acctacacggtcgaggtcgacaactccatcaccgtcagcggcggcacctggaacgcggtc
gtgaacggctcgggcgaccagtggatgacggctacgcaggcccgctccgcccttgcgccc
ggtgcagcgacagcgacagcgtcgatcctcggcggcggcaccgtgacgtacggcgaggtg
caaggcatccgtttcacctaccagcgcgtggccagcggctcgatcgccgacccgagcgcg
ccgctcctcctgttcgagaaccccgccaacccgacgttgaccgggaacctgttcgtgcag
cggcgtgacgcgctgctgaccggcggcgacgtgcccacgaccttgtcgggcaacaccgcc
tcacccggtacgacctcggcgggcgtcttccccaacaccgtggtcgccgatgcgaccggc
atccccggaaacggatcgccggccaccgacgatgccgacgcgaacttcacgttccgccac
ctgcccaccgcggcgacggtcgtcaagaccccgaccggtcaggtcgcgcccgggaccaac
ttcgaggtcgcgctcaccacgaccaacaacgggggctacccgatcctcaacccggtgatc
accgacaacctgccggtggggaccgtcgcggccgggctacccgactacgtgttcccggac
gggatcgacccgaccgatcccgcgaactacacgttcgcgctgagttcaggcagcgccccc
ggtgctccctggacggaactgccgatcgatcccgccgacgtcaacgtcgtcgtgacgtcc
tcgtccggtgtcgatccggagccggtcgcgatccgcttcgagttccccgcggattccgcg
ctcggactcggacaggtctaccgcatctcgtgggacatgcgcctgcgctccggtgcggtc
gcgaaccagccgttcaccaacgagtacgagatcaccggcgaccgcgacttcgactcgtgc
aacggcgtggccggcaccaccgacatctgctcgacgaccgcgaccgtcacgacgcagccc
ctcgcgacgttcgggatgttccagcaggtccgcgcgctggacccggcgctcggcgtcatc
tccagcaccgcagcaacgtgcaccatggccgacgctgaccctgacggcttcttcgtcgac
ccgtgtgctcccgtgaccaagcccggccagaacaacgaatggcggctgaactacgagaac
tggggaagctacccgctcgatgagatctcgacgatcatctacctgcccaacgctggtcag
agcggtatcgacatcccgaccgtcgacagcctgtggcggcccgtgctcgcttccgcgacc
ggtcccggcctgcgcgccgacgacaccccgaccgcggcccgcacggtctactacagcacc
gagtcccccggaacctcgctgtgcgacgacgtcctcaccgacggtggcacctgcccgccc
gggtattggcagcccctggacgcgtcggtcgacctgaccaccgtgaccgcgctgtacgtc
gtggtcgacttcgccgggggtggcgacctgctgcagccaggcgagaagttccaactcgcg
ttcgagaccacggctccgcccgccgcgttcaaccccgggaacgacccgatcacgtggaac
tcggccaagaccggcgggaagtacacgaccggcggcagccagcgcacccttccgccgttc
gaagtgcccgtcgtgggcgcgtcgctggccagcggaagcctccagctgaccaagaccgtc
gacggtgatgcatccggcgccgggtgggtccccacctcgttcgacggcacactctcgtgc
acctcggcaggcgtcgccgtgcccaccgcggcgatcccgaccgtgccgaccctgaccgat
ggcaccaccgtcacggtcggtggcctcccgtggggtgccgagtgcacgttcgtcgagacc
gacgcgggctcggatgtcacgctgtcaccgtccacggtgaccgtgagcaacgacccgacg
gccatcgaggtgcagagcgtcaccaacacgtacgactacgcgagcctgctggtcgagaag
accgtggaagttcccacccctccgggcacgacctacccggtacccactgacttcgcgttc
accgcggtctgtaccttcaacggcgcgacggtgctcaacgagacgttcctgctcgatgac
ggtgacacccgcctcttcgaggacctgccggctcgctcggagtgcgtggtcaccgaaacc
gacccccgtgatgccgacagcaccgtgacaagcgtcacggtcatcgacccgacggtcccc
ccgacgatcgaccagcccgcgcgccaggcgacgatccccgagttgagccccgactcggcc
ggcggtgacacgcagaacacggtctcgtatgtcaacagctacgacctcgtggcgctgacg
atcacgaaggacctcgagggcgaaggcgcggcgcagttcggcgcgaaccagaccttcacg
gtcgacgtcgtctgcaccttcgcgggagagaccctcgtcgacacgtcggtcgagctgagc
gccggcaacgcctggaccgcatcgctgaccggcctcatcgcgggatcggactgcgtcatc
accgaacccgacctcgagggcgcggatgccgtcgtcatcaccccgaacgacggcagcgac
accaccaccggtgagatcacgctgcccgacaccggcaccgcgaccgtgacggtcaccaac
tggtacctcaccggttcgctcgaggtcacgaaggtcttcgacggcgcggctgcgacccag
tacggcaccgccgacttcgacctcgagctggtctgcctgcgagatggcgtcgacgtcgac
atcccgggcggaaacgaccgcaccgtgaacgccacggcgccgacggcatcctggacccac
ctgcccacgggcgctgactgcaccctcgccgagaccggcatcgggggagcaggcgcaacc
gcgatcctggatgccggaggcagcgtactcgtcgacccggcgaccgacggctacacgttc
acggtcgtgaccgacccgacgatcctgaacgtcgccgaccagccgcagccgagcctgcag
gtgcgcaacaccttcacctacgccgaggtgtcggtcagcaaggtcgtcgagaccgaagcg
ctcgacaacaacggcgacccgattccgttcgggccgttcgaggtgacactccagtgcacc
tgggagagcgcgacggtaacggccaacgagccgatgacgcagacgatcggcgacggtgac
agcttcacgtggaccgggctacccgaaggggccgactgcgtgatcgaagagaccgatacg
gtcaacgccgcgtcgacgacgtacgagatcacgcagggcggtgccacggcacccgccgtc
gacgggatcgaggcgagcctcgcgccgcttccggccgagggtgcggccgaccagacgtcc
gtgctcttcacgaacgagtacccggtcgccccgatgatcatccgcaaggaggtcgacggc
acgggagctgccgatgtgacccgtagcttccccgtgaacgtacgctgtgtactgatcgac
gcatcgcaccctgacccgggcatcctggtgcgcgatgtcaacgtcgagatcggcgggccg
agcaacctgcagccggagatcgacttcctgccgctgggtagctcgtgcacgatcaccgag
accgacaccggcggggcatcatccgtctcgatcacgggcaccccgtacatgggtctgccc
ggggccggcggtgtgccgggcgcctcgaccaccgtcacggactcctcgatcacggtgacc
ttgagcgataaccactacctcgtcgagatcaccaacacgttcatcaaaccgctgccgccg
accggcgggatcttcgcctggaccgtgccgatcggcgcagccctgatgacggtgatcgga
ctcatgttcgtgctgtggcgccgcttcgaacccggtcgggactga
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integrated database retrieval system