Microbacterium schleiferi: IT882_03425
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Entry
IT882_03425 CDS
T07058
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
msf
Microbacterium schleiferi
Pathway
msf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IT882_03425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msf03400
]
IT882_03425
Enzymes [BR:
msf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IT882_03425
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IT882_03425
DNA repair and recombination proteins [BR:
msf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IT882_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
TniQ
DUF7573
Motif
Other DBs
NCBI-ProteinID:
QPE05159
UniProt:
A0A7S8MXP6
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All DBs
Position
complement(726200..727075)
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AA seq
291 aa
AA seq
DB search
MPEMPEVQGLVDYLDGRLPGLTVSRATVANIAALKTYDPPLDALVGTTVMSVSRHGKFID
IEAAADATAPLHLVFHLAKAGWLRWYDHLPTTIIRPGKTPIALRIAFSDGSGFDLTEAGT
KKSLAVYAAREPADVPGIARLGPDPLDPAFDREAFAALLSGRRTQIKGVLRDQSIIAGIG
NAYSDEILHAARMSPYALAANLSDEDIETLFAAMQQTLAEAIAEASGKPPTDLKDAKRRG
MRVHGRRGGACPVCGDEVRSVFFADNSLEYCPTCQTGGKLLADRRLSRLLK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgccggaagtacagggactggtcgactatctcgacggccgcctgccggga
ctcaccgtctcacgcgccacggtcgcgaacatcgctgcgctcaagacgtacgatcctccg
ctggacgcgctcgtcggcacgacggtgatgtcggtgtcgcgccacggcaagttcatcgat
atcgaggcggcggcggacgcgacagctcccctccacctcgtcttccatctcgcgaaggcc
ggatggctccgctggtacgaccacctccccaccacgatcatccgccccggaaagacgccg
atcgcgctgcgcatcgccttctcggatggctcggggttcgacctgacggaggcgggaacg
aagaagtcgctcgccgtgtacgcggcccgcgagcctgcagacgtgccgggcatcgcgcgg
ctcggccccgatcccctggacccggcgttcgaccgcgaagcgttcgccgcgttgctgtcg
ggtcgccgcacccagatcaaaggggttctgcgcgatcagtcgatcatcgccggcatcggc
aacgcatactccgatgagattctgcacgcggcacggatgtcgccctacgccctggctgca
aacctcagcgacgaggacatcgagaccctcttcgcggcgatgcagcagacgctcgccgag
gcgatcgccgaggcatccggcaagcccccgacagatctcaaggacgcgaagcgccgcggg
atgcgcgtgcacggccggcgcggcggggcgtgcccggtctgcggcgacgaggtgcgcagc
gtcttcttcgccgacaactccctcgagtactgcccgacgtgccaaaccggcggcaagctc
ctggccgatcgccgcctctcccgcctgctgaagtaa
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