Microbacterium schleiferi: IT882_04455
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Entry
IT882_04455 CDS
T07058
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
msf
Microbacterium schleiferi
Pathway
msf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IT882_04455 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msf03021
]
IT882_04455 (rho)
03019 Messenger RNA biogenesis [BR:
msf03019
]
IT882_04455 (rho)
Transcription machinery [BR:
msf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IT882_04455 (rho)
Messenger RNA biogenesis [BR:
msf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IT882_04455 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
Pentapeptide_2
AAA_22
Mor
Motif
Other DBs
NCBI-ProteinID:
QPE05326
UniProt:
A0A7S8RHP8
LinkDB
All DBs
Position
939178..941358
Genome browser
AA seq
726 aa
AA seq
DB search
MESISEVHTDASESDAVDQTAPAAAEAATQTETADAEAPEAADAGVEAPAEAPAAEADTS
AEAEAEAAEPSTADTAEVGTQAPEAAEAETVTTDAAAGAESAESTSAEQREPAAPAEAPA
EAAPAEEKAAEAPTKPVRKRAPRRAKSTDIPADQPAAETPAEPKAEESTDEAADTNTAAS
SDKPAGRGKSAGRRKASDNDTAAGTDEAAGTDTAAGTDKAADSDKPAEAAKTDDSSSSSE
SADDSGEESTPNRGRSRNRSRSRNRASGNSGSGNAGNGNAGNGNAGASGGADQSASTSGD
DEGGSTGGRGRQRNKRRGPNQNDEFEPEVGEDDVLIPIAGILDVLDNYAFVRTTGYLPGQ
SDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQTGRQKYNALVKVDAVNGLSVDDAATRV
EFSKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANA
IATNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLV
ELGRDVVVLLDSITRLGRAYNISAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLT
ILATALVETGSKMDEVIFEEFKGTGNSELRLNRQLADKRIFPAVDVNASSTRREEMLLSP
DEVKITWKLRRALAGLDPQQALEVVLGKLKETQSNVEFLVQMQKSIPAPTSNGHGAGGHG
HENSIR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgaggtccacactgacgcgtccgagagcgacgccgtcgatcagacc
gcccccgcggccgccgaggccgccactcagaccgagaccgctgacgcggaggcccccgag
gcagcggacgccggtgtcgaggccccggccgaagctccggctgcagaggccgatacatcg
gccgaggccgaagccgaggcagcggagccgtcgaccgccgacaccgccgaggtcggtact
caagcccctgaggccgccgaggcagagaccgtcaccactgacgcggctgcgggcgctgag
agcgcagaatcgacctccgccgagcagcgcgagcctgccgcgccggccgaagcccccgcc
gaagccgcccccgccgaggagaaggccgccgaagcgcccaccaagcctgtccgcaagcgg
gctcctcgccgagccaagagcactgacattcccgccgaccagcccgccgcagagacgccg
gccgagccgaaggccgaggaatccacggacgaggctgccgacacgaacacggctgccagc
agcgacaagcccgctggccgcggcaagtccgcaggccgccgcaaggcatccgacaatgac
acggctgctggcaccgacgaggctgctggcactgacacggctgccggcaccgacaaggct
gctgacagcgacaagcccgccgaggccgcaaagaccgacgactcgtcgtcgagttccgag
tccgccgacgattcgggcgaggaatccacgccgaaccgcggccgcagtcgcaaccgcagc
cggagccgcaaccgcgcgtccggcaacagtggcagtggcaacgcaggcaacggcaacgcc
ggcaacggaaatgcgggcgcctccggtggtgccgaccagtccgcgtccacgagcggcgac
gacgagggcggctcgaccggcggtcggggccggcagcgtaacaagcgtcgcggccccaat
cagaacgacgagttcgagcccgaggtcggcgaggacgatgtcctgatccccatcgccggc
attctcgacgtgctcgacaactacgctttcgttcgcacgaccgggtacttgcccggtcag
agcgacgtgtacgtctcgctcggtcaggtcaagaagtacaacctgcgcaagggcgacgcg
gtcgtcggtgccatcaagcagccgcgcgagggcgaacagactggccgccagaaatacaac
gcgctcgtcaaggtggatgccgtcaacggcctgtctgttgacgacgccgcgacccgcgtc
gagttcagcaagctcacgccgctgtacccccaggagcgcctgcgcctggagacggctccg
gagaagctcacgcagcggatcatcgacctggtcgccccgatcggcaagggccagcgcggc
ctgatcgtcgcgccccccaaggcgggcaagacgatcgtgctgcagcagatcgcgaacgcg
attgcgaccaacaaccccgaggtccacctcatggtcgtgctcgtcgacgagcgacccgaa
gaggtcaccgacatgcagcgcaccgtcaagggcgaggtcatcgcctcgaccttcgatcgt
cccgccgaggaccacacgacggtcgcggagctcgccatcgagcgcgccaagcgcctcgtc
gagctcggccgcgacgtcgtcgtgctgctggattcgatcacccgtctcgggcgcgcctac
aacatctccgccccgacctcgggccgcgtgctcaccggtggcgtcgacgcctcagcgctc
tacccgccgaagcgattcttcggtgctgcccgcaacatcgagaacggcggatcgctcacg
attcttgccacggcacttgtcgagaccgggtccaagatggacgaggtgatcttcgaggag
ttcaagggcaccggcaacagcgaactgcgtctgaaccgtcagctcgccgacaagcgcatc
ttcccggccgtcgacgtcaacgcctcgagcacacgtcgtgaagagatgctgctctcgccg
gacgaggtcaagatcacctggaagctgcgtcgcgctctggctggcctggacccgcagcag
gcgctcgaggtcgtgctcggaaagctcaaagagacccagtccaacgtcgagttcctcgtg
cagatgcagaagtcgattccggcgccgacctccaacggccacggcgcaggcggacacggt
cacgagaacagcatccgctga
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