Microbacterium schleiferi: IT882_06280
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Entry
IT882_06280 CDS
T07058
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msf
Microbacterium schleiferi
Pathway
msf03030
DNA replication
msf03430
Mismatch repair
msf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IT882_06280 (dnaE)
03430 Mismatch repair
IT882_06280 (dnaE)
03440 Homologous recombination
IT882_06280 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msf03032
]
IT882_06280 (dnaE)
03400 DNA repair and recombination proteins [BR:
msf03400
]
IT882_06280 (dnaE)
Enzymes [BR:
msf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IT882_06280 (dnaE)
DNA replication proteins [BR:
msf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IT882_06280 (dnaE)
DNA repair and recombination proteins [BR:
msf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IT882_06280 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
QPE05604
UniProt:
A0A7S8MYK0
LinkDB
All DBs
Position
1321067..1324585
Genome browser
AA seq
1172 aa
AA seq
DB search
MASDSFVHLHVHSEYSMLDGAARIGAMVQEAASQGSPAIAVTDHGNTFAAFEFYKAAKDV
GIKPIIGIEAYVTPGTHRSEKSRVRWGSPEQSDDDVSGAGAYTHMTLLSETTTGMHNLFR
LSSKASMEGYYFKPRMDRELLEKYSTGLIATTGCPSGEVQTRLRLGQYDAARAAAAEFQD
IFGKENYFAEIMDHGLDIERRVMTDLLSIAKDLNIPLLATNDSHYTHQHDANSHAALLCV
QSGSTLDDPKRFKFDGDGYYIRTPAEMRQIFRQHPEACDNTLLIAERCEVEFNTSANYMP
RFPVPDGETEESWFVKEVEAGLEERYPAGIPDEVRKQAEYEVGVIVQMGFPGYFLVVADF
INWAKRNGIRVGPGRGSGAGSMAAYAMRITDLDPLQHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIQYVTEKYGDDRVAQIVTYGTIKAKQALKDAGRVLGFPFSMGERLTKAMPPAV
MGKDVPLTDMFNKDHPRYKEAGEFRTLIETDQEAKTVFDTAVGLENLKRQWGVHAAGVIM
SSEPLIDIIPIMRREQDGQIVTQFDYPSCESLGLIKMDFLGLRNLTIINDALDNIEANRG
EPLILEDLALDDRASYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYRPG
PMGVNSHINYALRKNAQQEIEPIHKELEEPLADILDTTYGLIVYQEQVMAVAQRVAGYTL
GQADLLRRAMGKKKKSELDKQKEIFFGGMTERGFSDAAQQTLWKVLESFADYAFNKAHTA
AYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMAVYLNECRRMGIRVLPPDVNESIRY
FAAVGDDIRFGLGAVRNVGANVVEAIVQARVDEPFASFHDFLGRVPVSVANKRTVESLIK
AGAFDTLGATRRALLEIHEDATEQAVLDKRREANGEVGFDFDSLWGEDEPQQVNKVPERP
EWTKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHASINIHDLLGSEVLTDGDQVTIAGLV
TSVQHRVAKSSGNPYGMITVEDFDGEITVMFMGKTYTEFQSMLQADSILVVRGRVSRRDD
GMNLHAQAAFSPDLGSVDDSGPLVLVMPEQRATEAVIGDLADCLRRHSGDTEVTLRLHKG
GVAKVFEVPHQVSVTADLYGELKGLLGPQCLG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgactccttcgtccacctgcacgtgcacagcgagtattcgatgctcgacggg
gcagcgcgaatcggggcgatggtgcaagaagcagcctcgcaaggctcgccggccatcgct
gtcaccgaccacggcaatacgttcgcggcgttcgagttctacaaggccgcgaaggatgtc
ggcatcaagccgatcatcggcatcgaggcctatgtgacgcccggtacgcaccggtccgag
aagtcgcgtgtgcgctgggggtcgcctgaacagagcgacgacgatgtctcgggtgcgggt
gcttatacgcacatgactctgctgtcggagacgacgaccgggatgcacaacctcttccga
ctttcctcgaaggcatcgatggagggctactacttcaagccgcgcatggaccgcgagctg
ctggagaagtactcgacgggtctcatcgcgacgacgggatgcccgtcgggtgaggttcag
acgcggttgcgcctgggccagtacgacgcggcacgcgccgcggcggcggagtttcaggac
atcttcggcaaagagaactacttcgccgagatcatggatcacgggctcgacatcgaacgc
cgggtcatgaccgatctgctgagcatcgccaaagacctcaacatcccgttgctcgcgacg
aacgattcccactacacgcaccagcacgacgcgaacagtcacgcggcgctgctctgcgtg
caatccggatccacgctcgatgacccgaagaggttcaagttcgacggcgatgggtactac
atccgcacgcccgcagagatgcgccagatcttccggcagcatcccgaggcgtgcgacaac
acgctcttgatcgccgagcgctgcgaggtcgagttcaacaccagcgcgaactacatgccg
cgttttcccgttcccgacggggagaccgaggagagctggttcgtcaaggaagtcgaggcg
gggctcgaggagcgctacccggccgggattccggacgaggtccgcaagcaggccgagtac
gaggtcggcgtcatcgtgcagatggggttcccgggctacttcctcgtcgtcgccgacttc
atcaactgggcaaagcgcaacggcatccgtgtcggcccgggccgcgggtccggcgccggg
tccatggcggcgtacgcgatgcggatcacggatctcgacccgctgcagcacgggctcatc
ttcgagcgattcctcaaccccgaccgggtgtcgatgcccgacttcgatgtcgacttcgac
gaccgccgccgcggcgaagtgatccagtacgtcaccgagaagtacggcgacgaccgggtc
gctcagatcgtgacgtacggcaccatcaaggccaagcaggcgctcaaggatgccggtcgc
gtgctcggattcccgttcagcatgggcgagcgcctgacgaaggccatgccgcccgcggtg
atgggcaaggacgtgccgctgaccgacatgttcaacaaggatcacccccgctacaaagag
gccggggagttccgcacgctcatcgagaccgaccaggaagccaagacggtcttcgacact
gcggtcggccttgagaacctcaagcgccagtggggtgtgcacgcggctggcgtgatcatg
tcgagcgaaccgctcatcgacatcatcccgatcatgcgccgcgagcaggacggccagatc
gtcacgcagttcgactatccctcgtgcgagtcgcttggcctcatcaagatggacttcctg
gggcttcgaaacctcacgatcatcaacgatgccctcgacaacatcgaggcgaaccggggc
gaaccgctcatcctcgaggatctcgcgctcgacgatcgtgcgtcctacgagttgctcgcc
cgcggcgacacgctcggtgtcttccagctcgacggcgggcccatgcgctcgcttctgcgg
ctgatgaagcccgacaacttcgaagacatctcggcggtgctcgccctgtaccggcccggt
ccgatgggcgtgaactcgcacatcaactacgccctccgcaagaacgcgcagcaggagatc
gagccgatccacaaggagctcgaagagcccctggccgacatcctcgacaccacgtacggc
ctcatcgtctatcaggagcaggtgatggccgtcgcccagcgcgtggccggctacacgctc
ggtcaggcggatctgctgcgccgcgcgatgggtaagaagaagaagtccgagctcgacaag
cagaaagagatcttcttcggcggcatgaccgagcgcgggttctcggatgccgcgcagcag
acgctgtggaaggtgctcgagtccttcgcggactacgccttcaacaaggcgcacacggcc
gcctacgggctcgtctcgtactggacggcgtatctgaaggcccactaccccgcggagtac
atggcggcgctgctcacgagcgtcggcgactcgaaagacaagatggccgtctacctcaac
gagtgccggcggatgggcatccgggtgctcccgccggacgtgaacgagtcgatccgctac
ttcgcggccgtcggggacgacatccgtttcggcctcggcgccgtgcgcaacgtcggcgcg
aacgtcgtggaagcgatcgtgcaggcgcgcgtcgacgagcccttcgcctcgttccacgac
ttcctcggtcgcgtgccggtctcggtcgcgaacaagcggaccgtggagtcgctgatcaaa
gccggtgctttcgacacgctgggcgcgacacggcgggcgcttctggagatccacgaggat
gccaccgagcaggctgtcctcgacaagcgtcgcgaggccaacggcgaggtcgggttcgac
ttcgattcgctgtggggagaggacgaaccccagcaggtcaacaaggttcccgagcgtccg
gagtggaccaagaaagacaagctggccttcgaacgcgagatgctggggctctacgtctcg
gatcatccgctcgcgggactcgaggtgccgcttgcgaagcacgcctcgatcaacatccac
gatctgttgggctcggaagtcttgaccgacggcgatcaggtgaccatcgcgggcctggtg
acaagcgtgcagcatcgggttgccaagtccagcggcaacccctacggcatgatcacggtc
gaggacttcgacggcgagatcactgtcatgttcatgggcaagacctacaccgagttccag
tcgatgctgcaggctgactcgatcctggtggtgcgggggcgcgtgtcccgacgcgacgac
ggcatgaacctgcacgcgcaggcggctttctcacccgacctcggttccgtcgatgattcg
ggaccgctcgtgctcgtcatgcccgaacagcgggccaccgaggctgtcatcggtgatctc
gccgactgcctgcgccgtcacagcggtgataccgaagtaacgctgcggctgcacaagggc
ggggtcgcgaaggtgttcgaggtaccgcatcaggtgagcgtcaccgccgacctgtatggg
gagctcaaggggctgctcggcccgcaatgcctgggataa
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