Microbacterium schleiferi: IT882_07355
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Entry
IT882_07355 CDS
T07058
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
msf
Microbacterium schleiferi
Brite
KEGG Orthology (KO) [BR:
msf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msf03019
]
IT882_07355
Enzymes [BR:
msf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IT882_07355
Messenger RNA biogenesis [BR:
msf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IT882_07355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
MTR4_beta-barrel
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPE05781
UniProt:
A0A7S8RIU0
LinkDB
All DBs
Position
1530010..1532505
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AA seq
831 aa
AA seq
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MSVPSPAERFARAEAARAYPVTAAFADAQRFELDPFQIAGCHALESGRSALVAAPTGAGK
TIVGEFAIHLAMREPSDKAFYTTPMKALSNQKFRELVDVYGPDGVGLLTGDTNINGNARV
VVMTTEVLRNMLYAGSPALRDLRYVVMDEVHYLADRFRGAVWEEVIIHLPPAVRIVSLSA
TVSNAEEFGDWLDTVRGDTDVIVSETRPVPLEQHVLVRGDLLPLFDDRAGVATAQVNQEL
MRIRSFKGSTYENNRRVQASRSAAMSGSRARDGQHRRPHRGGHRPVRAANAQRIERLDRP
EVIELLARSNLLPAIFFIFSRAGCDAAVQQVRRSGARFTSPEERAEIRAIVEERTRTLLE
EDLAVLGFWEWRENLERGVAAHHAGLLPAFKEVVEELYQRKLVKVVFATETLALGINMPA
RTVVLEKLEKFNGEARVAITSGEYTQLTGRAGRRGIDVEGHAVVQWTEGLDPQAVAALAS
RRTYPLNSSFRPTYNMAVNLIDQFGRARAREILESSFAQFQADRAVVGLARQVKDAEESL
AGYAKAMSCDKGDFAAYSGIRRELSDLEKLNRKDANASRQTRDKRQRQISELRRRMQRHP
CHQCPDREHHARWAERYWKLNRTVSRLRGQIDARTGTVARVFDRIVDVLATLDYVRVEPD
ETATLTPAGRTMRRIYGERDLLVAESLRLGLWESLDAPSLAALACALVYEPRRDEAGAGE
RALPRGAFREALAQTLDLWQRLDDLEQDSRLPGSEPPAAGLSLAMHQWAKGMPLDRVLRE
ADMAAGDFVRWAKQTIDLLDQMSLVAEPSLATVARRALDGVRRGIVAYSSV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgttccgagccccgcggagcgattcgcgcgcgccgaggctgctcgtgcgtacccg
gtgacggcggccttcgccgacgcgcagcggttcgagctcgatccgttccagatcgccggg
tgccatgccctcgaatcggggcgaagcgcgctcgttgcggcgccgacgggtgcgggaaag
accatcgtcggagagtttgcgattcatctggcgatgcgggaaccgtccgacaaggcgttc
tacacgacgccgatgaaggcgctgtcgaaccagaagttccgcgagctggtggatgtctac
ggccccgacggggtgggacttctcacgggcgacaccaacatcaacggaaacgcccgcgtc
gtcgtcatgacgaccgaggtgctgcgcaacatgctctacgcagggtcgccggcgctgcgg
gacctccgctacgtcgtgatggacgaggtccactaccttgccgaccggttccgcggggcc
gtgtgggaagaggtgatcatccacctgcccccggcggtgcgcatcgtctcgctctcggcg
accgtatcgaacgctgaagagttcggagactggctcgacacggtgcggggagacaccgat
gtcatcgtgtcggagacccggccggtgccgctcgaacaacacgtgctcgtgcgcggagat
ctgctgccgctcttcgatgaccgtgccggcgtcgcaacggcgcaggtgaatcaagaactc
atgcgcatccgctcgttcaagggctcgacgtatgagaacaaccgacgcgtgcaggccagc
cgcagcgccgccatgtcgggaagccgcgcccgcgatggccagcaccgccgaccacaccgg
ggcgggcaccggccggttcgggcggcgaacgcgcaacgtatcgaacggctcgaccgcccc
gaggtcatcgagttgctcgctcggtcgaacctgctcccggcgatcttcttcattttcagc
cgcgccggatgcgacgctgccgtgcagcaggtgcggcgctccggagcacggttcacctcc
ccggaggaaagagccgagatccgtgcgatcgtcgaagagcgtacgcgcacgctgctcgag
gaggatctggcagttctcggattctgggagtggcgtgagaacctcgagcgcggcgtagcc
gctcaccacgccgggctgcttcccgccttcaaagaggtcgtcgaggagctgtaccagaga
aagctcgtcaaggtcgtgttcgcgactgagacgctcgcgctcggcatcaacatgcccgcg
cgcaccgtcgtgctggagaagctcgagaagttcaacggtgaggctcgggtggcgatcacg
tcgggggagtacacccagctcaccggtcgcgctggacggcgggggatcgacgtcgaaggt
catgctgtcgtgcagtggaccgagggactcgacccgcaggctgtcgccgcgctcgcatcc
cgtcgcacgtatccgctgaactccagctttcggcccacgtacaacatggccgtcaacctc
atcgaccagttcggccgggctcgggcgcgagagattctggagtcctctttcgcgcagttc
caagccgaccgcgcggtggtcggcctggcacgccaagtgaaagacgctgaggagtcgctc
gcggggtatgcgaaggcgatgagttgcgacaagggcgacttcgccgcgtactccgggatc
cgtcgcgagctcagcgacctcgagaagctcaaccgcaaggacgcgaatgcctctcggcag
acaagggacaagcggcagcgccagatcagcgagctgcgacgacggatgcagcggcatccg
tgtcaccagtgcccggaccgcgagcaccacgcccggtgggcggaacggtactggaagctc
aaccgcaccgtctcgcggcttcgcggccagatcgatgcgcggacgggaactgtcgcgcgc
gtgttcgaccgcatcgtcgatgtactggcgaccctcgactacgtgcgcgtcgagccggac
gagacggcaacactcacgcccgctggtcgcacgatgcgtcggatctacggggagcgggat
ctgctcgttgccgagtcacttcgcctcggactgtgggaatccctggacgcgccgtcactc
gccgcgttggcgtgtgcgctggtgtacgaaccgcgccgcgacgaagcgggcgcgggggag
cgggcgctgccccgtggcgccttccgggaggcactcgcgcagactctcgatttgtggcag
cgtctggacgatctcgaacaggactcccgcctgcccggatcggagccgcccgctgcgggc
ctgtcgcttgcaatgcaccaatgggcgaaggggatgccactcgaccgcgtcctgcgcgag
gctgacatggcagccggcgacttcgtgcgatgggccaagcagacgattgaccttctcgat
cagatgtcgctggtcgccgagccgagtcttgccactgtcgcgcggcgcgcgctcgatggc
gttcgtcgcggcatcgtggcgtattcctcggtgtga
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