Microbacterium schleiferi: IT882_08380
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Entry
IT882_08380 CDS
T07058
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
msf
Microbacterium schleiferi
Pathway
msf03030
DNA replication
msf03430
Mismatch repair
msf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IT882_08380 (holA)
03430 Mismatch repair
IT882_08380 (holA)
03440 Homologous recombination
IT882_08380 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msf03032
]
IT882_08380 (holA)
03400 DNA repair and recombination proteins [BR:
msf03400
]
IT882_08380 (holA)
Enzymes [BR:
msf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IT882_08380 (holA)
DNA replication proteins [BR:
msf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IT882_08380 (holA)
DNA repair and recombination proteins [BR:
msf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IT882_08380 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QPE03415
UniProt:
A0A7S8MVT5
LinkDB
All DBs
Position
complement(1757439..1758467)
Genome browser
AA seq
342 aa
AA seq
DB search
MAAPRRSSPSKSAIRQVPWRDPRPAPIVLVSGPEDVCAERAIASLRDYVRAEDPAVEVTD
LRADDYVAGTLLTVTSPSLFGEPRLVRVFGVEKASDPFLTEALAYLEAPQDGATVVLRHT
GASVRGKKLLDAVRSGKADAIEIACPAIKRDSDRYDFAAAEFAAVNKRIAPPALRALVSA
FSDDLTELAAACQQLIADVDGDVTDDIVRRYYGGRVETTAFAVADTAIAGRYGEALITLR
HALASGADPVPLVAAIASKLRTMARVAGLRESSAAIAARIGVKDWQVDRARRDLAGWNEE
SLGRAIQAAARADAEVKGASRDPIFALERLVTIVATRSEFGS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccccgtcgatcgagtccctcgaagtcggcgatcaggcaggtgccgtggcgt
gacccccggcccgcgccgatcgtgctggtgtccggccccgaggatgtgtgcgccgagcgc
gcgattgcgagcctccgcgactatgtccgcgccgaagaccccgctgtcgaggtgaccgac
ctgcgcgccgatgactacgtcgcgggaaccttgctgaccgtcacttcaccctcgctgttc
ggtgagccgcggctggtgcgcgtcttcggtgtcgagaaggcgtccgacccgttcctcacc
gaagccctcgcgtacctggaggcgccccaggacggcgcaaccgtggtgttgcgacacacc
ggcgcgtcggtgcggggaaagaagctcctggacgcggtccgcagcggcaaggccgatgcc
attgagatcgcctgcccggcgatcaagcgcgacagcgaccgttacgacttcgcggcggcc
gagttcgccgccgtgaacaagcggatcgccccgccggcccttcgcgcgctcgtctcggcg
ttctccgacgacctcaccgagcttgccgcggcgtgccaacagctcatcgccgatgtcgac
ggcgacgtcaccgacgacatcgtccggcgctactacggcggcagagtcgagacaacagcc
ttcgccgtcgccgataccgcgatcgccggacggtacggcgaggcgctgatcacgctccga
cacgcgctggcaagtggagctgacccggtgccgctcgtggccgcgatcgcgtccaagttg
cggaccatggcccgcgtcgctggcctccgcgagtcctccgcggcgatcgccgcgcggatc
ggcgtcaaggattggcaggtcgaccgcgcccgtcgtgatctggcgggatggaacgaggag
tcactcgggcgcgcgattcaggcggcggcgcgagcggatgccgaggtcaagggtgcgtcg
cgggaccccatcttcgcgctcgagcgtctcgtgacgatcgtcgcgacgcgcagcgagttc
ggcagctga
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