Microbacterium schleiferi: IT882_12245
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Entry
IT882_12245 CDS
T07058
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msf
Microbacterium schleiferi
Brite
KEGG Orthology (KO) [BR:
msf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msf03032
]
IT882_12245 (topA)
03400 DNA repair and recombination proteins [BR:
msf03400
]
IT882_12245 (topA)
Enzymes [BR:
msf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IT882_12245 (topA)
DNA replication proteins [BR:
msf03032
]
Prokaryotic type
DNA Topoisomerases
IT882_12245 (topA)
DNA repair and recombination proteins [BR:
msf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IT882_12245 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QPE03992
UniProt:
A0A7S8RH29
LinkDB
All DBs
Position
complement(2521905..2524637)
Genome browser
AA seq
910 aa
AA seq
DB search
MATGKKLVIVESPTKMKSIQGYLGDGYEVLSSVGHIRDLASKKDIPAEKKQAYGKYSIDV
DNDFDPYYVISDRKTKTVAELKRALKDADEVLLATDEDREGEAIAWHLLEVLKPKVPVKR
MVFHEITKDAIRAAVDKTRDLDLALVDAQETRRVLDRLYGWDVSPVLWRKVGSGREGAAL
SAGRVQSAATRMVVERERERMAFVTADYWDVEALAGKDGSSFTTRLARLDGASLARGTDF
DDQGQLKKAVVVLDEAAARALATAVETAAEASVTALDAKPGTRSPKPPFTTSTLQQEAGR
KLSMSAKHAMSVAQRLYEKGYITYMRTDSTALSTQAVTAARTQAVDLYGDKAVPLNPRTY
RNNSKNAQEAHEAIRPSGEFFRRPTEVTGQLDRDEERMYDLIWKRTIASQMSDAKYETTT
VTLAIEADGKKAEFTASGTVYTFKGFLEAYEEGRDEKRSDADRSDDQSLPALAVGDVLSL
TDVEPKGHSTSPKPRYTEASLVKALEEKGIGRPSTFASIIDVILDRGYVTKRGQALVPSW
VAFSVVRLLEEHFSELVDYDFTAALEDDLDAIARGEQKRIEWLKEFYYGSDAHVGLRNIV
DNLGDIDARELNARPISDTVTLRVGKYGPYLEIVDPDKPEDTPRRVNIPDDLAPDELTPE
KAQELIDAPVAGNRVLGENPANNKLVVVKDGRFGPYIEETDPETVAAVDPDTGEVLETAP
AAEAPATTGKKSKAKTAAPKNRTASLFRSMSVDTIDLETALRLLDLPRVVGEDPATGEQI
TAQNGRFGPYLKKGTDSRSLESEAQIFDVTLEQALELYAQPKYGARRASSALKEFDADPT
SGKPIRLKDGRFGPYVTDGETNATIPRGEQVDDVTFERAVQLLADKRAKGPAPKRTTKRS
TTTRKTTAKK
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
ttggccacaggcaagaagctcgtcatcgtcgagtccccgacgaagatgaagtcgatccag
ggatacctgggcgacgggtacgaagtgctcagctcggtgggacacatccgcgacctcgcg
agcaagaaggacatcccggccgagaaaaagcaggcctacgggaagtactcgatcgacgtc
gataacgacttcgacccctattacgtcatcagcgatcgcaagacgaagaccgttgccgag
ctcaagcgcgccctcaaggatgccgacgaggtgctgctcgcaacagatgaagaccgcgag
ggcgaggccatcgcgtggcacctgctcgaggtgctcaagcccaaggtcccggtcaagcgc
atggtcttccacgagatcacgaaggacgcgatccgcgccgccgtcgacaagacccgagac
ctcgatctcgccctggtcgatgcgcaggagacccggcgcgtcctcgaccggctctatggg
tgggatgtctcgccggtgttgtggcgcaaggtcggctcgggccgcgaaggagccgcgctc
tctgccggccgcgtgcagtccgctgccacccgcatggtcgtcgagcgcgaacgggagcgg
atggcgttcgtcaccgccgactactgggacgtcgaggcgctcgccggcaaggacggatcc
tcattcacgacgcgtctcgcgcgccttgacggcgcctctctcgctcgcggaacggacttc
gatgaccaggggcagctgaagaaagccgtcgtcgtcctcgacgaagctgccgcgcgagca
ctggccactgccgtcgagacggcggccgaggcatccgtcacggctcttgacgcaaagccc
ggtacgcgcagccccaagccgccgttcacgacctcgaccctgcagcaagaggccggccgc
aagctctcgatgagcgcgaagcacgcgatgagcgtcgcgcagcgcttgtacgagaagggg
tacatcacgtacatgcgcaccgactcgacagctctgtcgacgcaggcggtcaccgccgcg
cgcacccaggccgtcgatctctacggcgacaaggccgtgccgctgaatccccgcacgtac
cgcaataacagcaagaacgcgcaagaggcgcacgaggctatccgtccgtcgggcgagttc
ttccggcgccccaccgaggtgaccggtcagctcgaccgtgatgaagagcggatgtacgac
ctcatctggaagcgaacgatcgccagccagatgtcggatgcgaagtacgagaccacgacg
gtcacgctcgctatcgaggccgacgggaagaaggccgagttcacggcatccggcaccgtc
tacaccttcaaggggttcctcgaggcgtacgaggagggccgcgacgagaagcgcagcgac
gccgatcgctccgacgaccagtcgctgccggcgcttgccgtcggcgatgtgctgagcctg
acggatgtcgagcccaagggccacagcacgagccccaagccccgctacaccgaggcgagc
ctggtgaaggcgctcgaagagaagggcatcgggcgcccgtcgaccttcgcgagcatcatc
gacgtcatcctcgatcggggatacgtcaccaagcgtggtcaggcactcgtgcccagctgg
gttgcgttcagcgtcgtgcgtctgctcgaggagcacttctcggaactcgtcgactacgac
ttcacggcggcgctggaagacgacctcgacgccatcgcgcgcggcgagcagaagcgcatc
gagtggctcaaggagttctactacggttcggatgcccatgtcggcctgcgcaacatcgtc
gacaacctcggcgacatcgacgcgcgagagctcaacgctcgcccgatcagcgacaccgtg
acgctccgtgtgggcaagtacgggccgtacctcgagatcgtcgaccccgacaagcccgag
gacacgccgcggcgcgtcaatatccccgacgacctcgcgcccgatgagctcacgcccgag
aaggcgcaggaactgatcgatgcgccggtcgcggggaaccgcgtgctcggcgagaatccc
gcaaacaacaagctcgtcgtggtcaaggacggccgtttcggtccctatatcgaagagacc
gatcccgagactgtcgctgctgtggaccccgataccggcgaggttctcgagacggcaccg
gccgccgaggcgccggcgaccacggggaagaagtccaaggcgaagactgcagcgcccaag
aaccgcaccgcgtcgctgttccgttccatgtcggtcgacacgatcgacctcgagacggcg
ctgcgtctgctggatcttccccgtgtcgtcggggaggacccggcaacgggcgagcagatc
accgcccagaacggccggttcggtccgtacctgaagaagggcaccgactcgcgctcgttg
gagagtgaagcccagatcttcgacgtcaccctcgagcaggcgctcgagctctacgcgcag
ccgaagtacggcgctcgccgcgcgtcgagcgcgctcaaggagttcgacgctgacccgacc
agcggaaagccgatccgtctgaaggacggtcggtttggaccctatgtcaccgacggtgag
accaacgcgaccattccgcggggcgagcaggtcgatgacgtgacgttcgagcgggccgtg
cagctgctggccgacaagcgggccaagggaccggcgcccaagcggacgaccaagcgcagc
acgacgacgcgcaagacaacggccaagaagtga
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